Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00650 and IAI46_00655 are separated by 135 nucleotides IAI46_00655 and IAI46_00660 are separated by 62 nucleotides IAI46_00660 and IAI46_00665 are separated by 43 nucleotides IAI46_00665 and IAI46_00670 are separated by 74 nucleotides
IAI46_00650: IAI46_00650 - amino acid permease, at 153,475 to 154,878
_00650
IAI46_00655: IAI46_00655 - tRNA-Arg, at 155,014 to 155,090
_00655
IAI46_00660: IAI46_00660 - tRNA-His, at 155,153 to 155,228
_00660
IAI46_00665: IAI46_00665 - tRNA-Leu, at 155,272 to 155,358
_00665
IAI46_00670: IAI46_00670 - tRNA-Pro, at 155,433 to 155,509
_00670
Position (kb) 155
156 Strain fitness (log2 ratio) -2
-1
0
1
2 at 154.317 kb on + strand, within IAI46_00650 at 154.317 kb on + strand, within IAI46_00650 at 154.342 kb on - strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.390 kb on + strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.391 kb on - strand, within IAI46_00650 at 154.393 kb on - strand, within IAI46_00650 at 154.404 kb on + strand, within IAI46_00650 at 154.404 kb on + strand, within IAI46_00650 at 154.404 kb on + strand, within IAI46_00650 at 154.405 kb on - strand, within IAI46_00650 at 154.411 kb on + strand, within IAI46_00650 at 154.411 kb on + strand, within IAI46_00650 at 154.412 kb on - strand, within IAI46_00650 at 154.412 kb on - strand, within IAI46_00650 at 154.412 kb on - strand, within IAI46_00650 at 154.511 kb on + strand, within IAI46_00650 at 154.528 kb on - strand, within IAI46_00650 at 154.531 kb on + strand, within IAI46_00650 at 154.532 kb on - strand, within IAI46_00650 at 154.564 kb on + strand, within IAI46_00650 at 154.564 kb on + strand, within IAI46_00650 at 154.565 kb on - strand, within IAI46_00650 at 154.565 kb on - strand, within IAI46_00650 at 154.570 kb on + strand, within IAI46_00650 at 154.570 kb on + strand, within IAI46_00650 at 154.570 kb on + strand, within IAI46_00650 at 154.571 kb on - strand, within IAI46_00650 at 154.630 kb on + strand, within IAI46_00650 at 154.631 kb on - strand, within IAI46_00650 at 154.674 kb on + strand, within IAI46_00650 at 154.675 kb on - strand, within IAI46_00650 at 154.675 kb on - strand, within IAI46_00650 at 154.683 kb on + strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.684 kb on - strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.693 kb on + strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.694 kb on - strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.702 kb on + strand, within IAI46_00650 at 154.703 kb on - strand, within IAI46_00650 at 154.703 kb on - strand, within IAI46_00650 at 154.703 kb on - strand, within IAI46_00650 at 154.813 kb on + strand at 154.813 kb on + strand at 154.933 kb on - strand at 155.234 kb on + strand at 155.234 kb on + strand at 155.322 kb on + strand, within IAI46_00665 at 155.396 kb on + strand at 155.416 kb on + strand at 155.416 kb on + strand at 155.543 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.551 kb on + strand at 155.552 kb on - strand at 155.552 kb on - strand at 155.552 kb on - strand at 155.558 kb on + strand at 155.558 kb on + strand at 155.558 kb on + strand at 155.559 kb on - strand at 155.727 kb on + strand at 155.761 kb on + strand at 155.761 kb on + strand at 155.770 kb on + strand at 155.771 kb on - strand at 155.850 kb on - strand at 155.931 kb on - strand at 155.997 kb on + strand at 156.065 kb on + strand at 156.066 kb on - strand at 156.066 kb on - strand at 156.066 kb on - strand at 156.069 kb on + strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.070 kb on - strand at 156.089 kb on + strand at 156.089 kb on + strand at 156.089 kb on + strand at 156.089 kb on + strand at 156.089 kb on + strand at 156.089 kb on + strand at 156.090 kb on - strand at 156.090 kb on - strand at 156.090 kb on - strand at 156.090 kb on - strand at 156.100 kb on + strand at 156.101 kb on - strand at 156.110 kb on - strand at 156.138 kb on + strand at 156.148 kb on - strand at 156.148 kb on - strand at 156.148 kb on - strand at 156.257 kb on - strand at 156.296 kb on + strand at 156.296 kb on + strand at 156.296 kb on + strand at 156.296 kb on + strand at 156.297 kb on - strand at 156.297 kb on - strand at 156.297 kb on - strand at 156.297 kb on - strand at 156.305 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 154,317 + IAI46_00650 0.60 +0.4 154,317 + IAI46_00650 0.60 -0.1 154,342 - IAI46_00650 0.62 -0.2 154,390 + IAI46_00650 0.65 +0.1 154,390 + IAI46_00650 0.65 -0.8 154,390 + IAI46_00650 0.65 -0.3 154,390 + IAI46_00650 0.65 +0.0 154,390 + IAI46_00650 0.65 +0.2 154,391 - IAI46_00650 0.65 -0.0 154,391 - IAI46_00650 0.65 -0.8 154,391 - IAI46_00650 0.65 -1.0 154,391 - IAI46_00650 0.65 +0.0 154,391 - IAI46_00650 0.65 +0.5 154,391 - IAI46_00650 0.65 +0.6 154,391 - IAI46_00650 0.65 +0.5 154,391 - IAI46_00650 0.65 +0.1 154,393 - IAI46_00650 0.65 +0.6 154,404 + IAI46_00650 0.66 -1.5 154,404 + IAI46_00650 0.66 +0.9 154,404 + IAI46_00650 0.66 -1.4 154,405 - IAI46_00650 0.66 +0.6 154,411 + IAI46_00650 0.67 -0.1 154,411 + IAI46_00650 0.67 -0.2 154,412 - IAI46_00650 0.67 +1.2 154,412 - IAI46_00650 0.67 +0.0 154,412 - IAI46_00650 0.67 -0.9 154,511 + IAI46_00650 0.74 -0.1 154,528 - IAI46_00650 0.75 +0.5 154,531 + IAI46_00650 0.75 +1.6 154,532 - IAI46_00650 0.75 -0.2 154,564 + IAI46_00650 0.78 +0.4 154,564 + IAI46_00650 0.78 -0.2 154,565 - IAI46_00650 0.78 -0.0 154,565 - IAI46_00650 0.78 -0.0 154,570 + IAI46_00650 0.78 -2.2 154,570 + IAI46_00650 0.78 -0.9 154,570 + IAI46_00650 0.78 -0.1 154,571 - IAI46_00650 0.78 +1.2 154,630 + IAI46_00650 0.82 +0.2 154,631 - IAI46_00650 0.82 +0.7 154,674 + IAI46_00650 0.85 -0.9 154,675 - IAI46_00650 0.85 +0.6 154,675 - IAI46_00650 0.85 -0.4 154,683 + IAI46_00650 0.86 +1.1 154,684 - IAI46_00650 0.86 +1.7 154,684 - IAI46_00650 0.86 +0.5 154,684 - IAI46_00650 0.86 -0.1 154,684 - IAI46_00650 0.86 +0.0 154,684 - IAI46_00650 0.86 +0.7 154,684 - IAI46_00650 0.86 +0.7 154,693 + IAI46_00650 0.87 +0.2 154,693 + IAI46_00650 0.87 -0.4 154,693 + IAI46_00650 0.87 -0.3 154,693 + IAI46_00650 0.87 +0.3 154,694 - IAI46_00650 0.87 +0.4 154,694 - IAI46_00650 0.87 +0.9 154,694 - IAI46_00650 0.87 -0.6 154,694 - IAI46_00650 0.87 +0.6 154,702 + IAI46_00650 0.87 +0.8 154,702 + IAI46_00650 0.87 +0.6 154,702 + IAI46_00650 0.87 +0.4 154,702 + IAI46_00650 0.87 +0.3 154,702 + IAI46_00650 0.87 +0.6 154,702 + IAI46_00650 0.87 -0.6 154,702 + IAI46_00650 0.87 +1.1 154,703 - IAI46_00650 0.87 -0.9 154,703 - IAI46_00650 0.87 -0.2 154,703 - IAI46_00650 0.87 -0.2 154,813 + -0.1 154,813 + +0.5 154,933 - +0.6 155,234 + +0.1 155,234 + +0.2 155,322 + IAI46_00665 0.57 +0.2 155,396 + +1.9 155,416 + -0.3 155,416 + +0.3 155,543 + +0.7 155,551 + -0.1 155,551 + -0.5 155,551 + -0.2 155,551 + +0.0 155,551 + +0.7 155,552 - +1.3 155,552 - -0.5 155,552 - -0.9 155,558 + +1.1 155,558 + -0.3 155,558 + +0.1 155,559 - -0.2 155,727 + -0.1 155,761 + -0.6 155,761 + -1.0 155,770 + -0.3 155,771 - +0.1 155,850 - +0.2 155,931 - +0.5 155,997 + +0.0 156,065 + -0.3 156,066 - +0.7 156,066 - -1.4 156,066 - +0.3 156,069 + +0.8 156,070 - -0.9 156,070 - -0.3 156,070 - +0.5 156,070 - -1.9 156,070 - +1.5 156,070 - +0.3 156,070 - +0.0 156,070 - -0.7 156,070 - -0.7 156,070 - +0.2 156,089 + +0.1 156,089 + +0.4 156,089 + -0.4 156,089 + +0.6 156,089 + -0.6 156,089 + -0.1 156,090 - -0.7 156,090 - +0.9 156,090 - +1.3 156,090 - +0.2 156,100 + -0.7 156,101 - -1.6 156,110 - -0.4 156,138 + -0.2 156,148 - +0.5 156,148 - -0.2 156,148 - +0.1 156,257 - -0.5 156,296 + +0.7 156,296 + +0.8 156,296 + -0.2 156,296 + +0.5 156,297 - +0.5 156,297 - +0.2 156,297 - +0.6 156,297 - -0.2 156,305 + +0.2
Or see this region's nucleotide sequence