Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4425 and EX28DRAFT_4426 are separated by 196 nucleotides EX28DRAFT_4426 and EX28DRAFT_4427 are separated by 9 nucleotides EX28DRAFT_4427 and EX28DRAFT_4428 are separated by 79 nucleotides
EX28DRAFT_4425: EX28DRAFT_4425 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 92,181 to 93,581
_4425
EX28DRAFT_4426: EX28DRAFT_4426 - transcriptional regulator, TetR family, at 93,778 to 94,416
_4426
EX28DRAFT_4427: EX28DRAFT_4427 - Protein of unknown function (DUF1422), at 94,426 to 94,785
_4427
EX28DRAFT_4428: EX28DRAFT_4428 - tRNA (uracil(54)-C(5))-methyltransferase, at 94,865 to 95,977
_4428
Position (kb) 94
95 Strain fitness (log2 ratio) -1
0
1 at 93.465 kb on - strand at 93.465 kb on - strand at 93.549 kb on - strand at 93.603 kb on + strand at 93.651 kb on - strand at 93.651 kb on - strand at 93.651 kb on - strand at 93.693 kb on - strand at 93.693 kb on - strand at 93.726 kb on - strand at 93.741 kb on + strand at 93.742 kb on - strand at 93.743 kb on + strand at 93.743 kb on + strand at 94.193 kb on - strand, within EX28DRAFT_4426 at 94.366 kb on + strand at 94.495 kb on - strand, within EX28DRAFT_4427 at 94.567 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.658 kb on - strand, within EX28DRAFT_4427 at 94.658 kb on - strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.660 kb on - strand, within EX28DRAFT_4427 at 94.699 kb on - strand, within EX28DRAFT_4427 at 94.776 kb on - strand at 94.806 kb on + strand at 94.807 kb on - strand at 94.859 kb on + strand at 94.898 kb on - strand at 95.094 kb on + strand, within EX28DRAFT_4428 at 95.217 kb on + strand, within EX28DRAFT_4428 at 95.218 kb on - strand, within EX28DRAFT_4428 at 95.275 kb on + strand, within EX28DRAFT_4428 at 95.424 kb on + strand, within EX28DRAFT_4428 at 95.620 kb on + strand, within EX28DRAFT_4428 at 95.620 kb on + strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 93,465 - +0.6 93,465 - -0.1 93,549 - +0.2 93,603 + -0.6 93,651 - +0.1 93,651 - -0.1 93,651 - +0.1 93,693 - +0.8 93,693 - +0.7 93,726 - +0.7 93,741 + +0.1 93,742 - -0.0 93,743 + -0.2 93,743 + -0.4 94,193 - EX28DRAFT_4426 0.65 -0.5 94,366 + +0.1 94,495 - EX28DRAFT_4427 0.19 -0.2 94,567 + EX28DRAFT_4427 0.39 -0.0 94,655 + EX28DRAFT_4427 0.64 +0.6 94,655 + EX28DRAFT_4427 0.64 +0.6 94,655 + EX28DRAFT_4427 0.64 +0.5 94,656 - EX28DRAFT_4427 0.64 -0.0 94,656 - EX28DRAFT_4427 0.64 -1.6 94,656 - EX28DRAFT_4427 0.64 +0.3 94,656 - EX28DRAFT_4427 0.64 +0.4 94,656 - EX28DRAFT_4427 0.64 +0.7 94,656 - EX28DRAFT_4427 0.64 -0.4 94,656 - EX28DRAFT_4427 0.64 +0.1 94,656 - EX28DRAFT_4427 0.64 +0.3 94,656 - EX28DRAFT_4427 0.64 +0.5 94,657 + EX28DRAFT_4427 0.64 +0.4 94,657 + EX28DRAFT_4427 0.64 +0.1 94,657 + EX28DRAFT_4427 0.64 +0.9 94,657 + EX28DRAFT_4427 0.64 -0.1 94,658 - EX28DRAFT_4427 0.64 +0.3 94,658 - EX28DRAFT_4427 0.64 +0.1 94,659 + EX28DRAFT_4427 0.65 +0.5 94,659 + EX28DRAFT_4427 0.65 +0.3 94,659 + EX28DRAFT_4427 0.65 -0.1 94,659 + EX28DRAFT_4427 0.65 -0.1 94,659 + EX28DRAFT_4427 0.65 +0.4 94,659 + EX28DRAFT_4427 0.65 +0.1 94,660 - EX28DRAFT_4427 0.65 +0.2 94,699 - EX28DRAFT_4427 0.76 -0.3 94,776 - +0.6 94,806 + -0.3 94,807 - -0.2 94,859 + -0.5 94,898 - -0.6 95,094 + EX28DRAFT_4428 0.21 -0.5 95,217 + EX28DRAFT_4428 0.32 -0.6 95,218 - EX28DRAFT_4428 0.32 +0.0 95,275 + EX28DRAFT_4428 0.37 -0.4 95,424 + EX28DRAFT_4428 0.50 -0.1 95,620 + EX28DRAFT_4428 0.68 -0.1 95,620 + EX28DRAFT_4428 0.68 -0.2 95,621 - EX28DRAFT_4428 0.68 -0.2 95,621 - EX28DRAFT_4428 0.68 -0.0 95,621 - EX28DRAFT_4428 0.68 -0.8 95,621 - EX28DRAFT_4428 0.68 -1.3
Or see this region's nucleotide sequence