Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4274 and EX28DRAFT_4275 are separated by 44 nucleotides EX28DRAFT_4275 and EX28DRAFT_4276 are separated by 123 nucleotides
EX28DRAFT_4274: EX28DRAFT_4274 - transcriptional regulator, LacI family, at 79,125 to 80,177
_4274
EX28DRAFT_4275: EX28DRAFT_4275 - Pirin-related protein, at 80,222 to 80,917
_4275
EX28DRAFT_4276: EX28DRAFT_4276 - Predicted dehydrogenases and related proteins, at 81,041 to 82,078
_4276
Position (kb) 80
81 Strain fitness (log2 ratio) -2
-1
0
1 at 79.233 kb on - strand, within EX28DRAFT_4274 at 79.233 kb on - strand, within EX28DRAFT_4274 at 79.453 kb on + strand, within EX28DRAFT_4274 at 79.483 kb on + strand, within EX28DRAFT_4274 at 79.484 kb on - strand, within EX28DRAFT_4274 at 79.538 kb on + strand, within EX28DRAFT_4274 at 79.539 kb on - strand, within EX28DRAFT_4274 at 79.542 kb on - strand, within EX28DRAFT_4274 at 79.813 kb on + strand, within EX28DRAFT_4274 at 79.975 kb on + strand, within EX28DRAFT_4274 at 79.976 kb on - strand, within EX28DRAFT_4274 at 80.044 kb on - strand, within EX28DRAFT_4274 at 80.209 kb on + strand at 80.210 kb on - strand at 80.224 kb on - strand at 80.574 kb on + strand, within EX28DRAFT_4275 at 80.607 kb on + strand, within EX28DRAFT_4275 at 80.642 kb on - strand, within EX28DRAFT_4275 at 80.642 kb on - strand, within EX28DRAFT_4275 at 80.718 kb on + strand, within EX28DRAFT_4275 at 80.718 kb on + strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.829 kb on + strand, within EX28DRAFT_4275 at 80.829 kb on + strand, within EX28DRAFT_4275 at 80.830 kb on - strand, within EX28DRAFT_4275 at 80.906 kb on + strand at 80.910 kb on + strand at 80.910 kb on + strand at 80.910 kb on + strand at 80.911 kb on - strand at 80.911 kb on - strand at 80.911 kb on - strand at 80.949 kb on - strand at 80.977 kb on + strand at 81.174 kb on + strand, within EX28DRAFT_4276 at 81.175 kb on - strand, within EX28DRAFT_4276 at 81.239 kb on + strand, within EX28DRAFT_4276 at 81.239 kb on + strand, within EX28DRAFT_4276 at 81.240 kb on - strand, within EX28DRAFT_4276 at 81.240 kb on - strand, within EX28DRAFT_4276 at 81.243 kb on + strand, within EX28DRAFT_4276 at 81.370 kb on + strand, within EX28DRAFT_4276 at 81.472 kb on + strand, within EX28DRAFT_4276 at 81.472 kb on + strand, within EX28DRAFT_4276 at 81.473 kb on - strand, within EX28DRAFT_4276 at 81.495 kb on + strand, within EX28DRAFT_4276 at 81.496 kb on - strand, within EX28DRAFT_4276 at 81.496 kb on - strand, within EX28DRAFT_4276 at 81.544 kb on + strand, within EX28DRAFT_4276 at 81.544 kb on + strand, within EX28DRAFT_4276 at 81.545 kb on - strand, within EX28DRAFT_4276 at 81.545 kb on - strand, within EX28DRAFT_4276
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 79,233 - EX28DRAFT_4274 0.10 -1.9 79,233 - EX28DRAFT_4274 0.10 -0.4 79,453 + EX28DRAFT_4274 0.31 -1.3 79,483 + EX28DRAFT_4274 0.34 -1.4 79,484 - EX28DRAFT_4274 0.34 -0.2 79,538 + EX28DRAFT_4274 0.39 -1.9 79,539 - EX28DRAFT_4274 0.39 +0.2 79,542 - EX28DRAFT_4274 0.40 -0.4 79,813 + EX28DRAFT_4274 0.65 -1.0 79,975 + EX28DRAFT_4274 0.81 -1.4 79,976 - EX28DRAFT_4274 0.81 -1.7 80,044 - EX28DRAFT_4274 0.87 -1.4 80,209 + +0.4 80,210 - -0.3 80,224 - -1.5 80,574 + EX28DRAFT_4275 0.51 -0.2 80,607 + EX28DRAFT_4275 0.55 +0.2 80,642 - EX28DRAFT_4275 0.60 -0.1 80,642 - EX28DRAFT_4275 0.60 +0.6 80,718 + EX28DRAFT_4275 0.71 +0.5 80,718 + EX28DRAFT_4275 0.71 -0.4 80,719 - EX28DRAFT_4275 0.71 +1.3 80,719 - EX28DRAFT_4275 0.71 +0.7 80,719 - EX28DRAFT_4275 0.71 +0.4 80,719 - EX28DRAFT_4275 0.71 +0.4 80,719 - EX28DRAFT_4275 0.71 +0.9 80,719 - EX28DRAFT_4275 0.71 +0.0 80,719 - EX28DRAFT_4275 0.71 -0.7 80,829 + EX28DRAFT_4275 0.87 -0.2 80,829 + EX28DRAFT_4275 0.87 +1.2 80,830 - EX28DRAFT_4275 0.87 -0.3 80,906 + -0.5 80,910 + -0.3 80,910 + +0.1 80,910 + +0.2 80,911 - +0.4 80,911 - -0.4 80,911 - +0.3 80,949 - -1.1 80,977 + -0.1 81,174 + EX28DRAFT_4276 0.13 -0.3 81,175 - EX28DRAFT_4276 0.13 +0.2 81,239 + EX28DRAFT_4276 0.19 -0.3 81,239 + EX28DRAFT_4276 0.19 +0.3 81,240 - EX28DRAFT_4276 0.19 -0.7 81,240 - EX28DRAFT_4276 0.19 -0.6 81,243 + EX28DRAFT_4276 0.19 -0.2 81,370 + EX28DRAFT_4276 0.32 +0.3 81,472 + EX28DRAFT_4276 0.42 -0.6 81,472 + EX28DRAFT_4276 0.42 +0.2 81,473 - EX28DRAFT_4276 0.42 +0.6 81,495 + EX28DRAFT_4276 0.44 -0.5 81,496 - EX28DRAFT_4276 0.44 -0.2 81,496 - EX28DRAFT_4276 0.44 +0.2 81,544 + EX28DRAFT_4276 0.48 -0.3 81,544 + EX28DRAFT_4276 0.48 -0.2 81,545 - EX28DRAFT_4276 0.49 -0.2 81,545 - EX28DRAFT_4276 0.49 -1.5
Or see this region's nucleotide sequence