Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3957 and EX28DRAFT_3958 are separated by 460 nucleotides EX28DRAFT_3958 and EX28DRAFT_3959 are separated by 27 nucleotides EX28DRAFT_3959 and EX28DRAFT_3960 are separated by 46 nucleotides EX28DRAFT_3960 and EX28DRAFT_3961 are separated by 62 nucleotides
EX28DRAFT_3957: EX28DRAFT_3957 - hypothetical protein, at 166,703 to 167,416
_3957
EX28DRAFT_3958: EX28DRAFT_3958 - hypothetical protein, at 167,877 to 168,032
_3958
EX28DRAFT_3959: EX28DRAFT_3959 - hypothetical protein, at 168,060 to 168,242
_3959
EX28DRAFT_3960: EX28DRAFT_3960 - Acetyltransferase (GNAT) domain, at 168,289 to 168,735
_3960
EX28DRAFT_3961: EX28DRAFT_3961 - EamA-like transporter family, at 168,798 to 169,631
_3961
Position (kb) 168
169 Strain fitness (log2 ratio) -1
0
1
2 at 167.086 kb on + strand, within EX28DRAFT_3957 at 167.087 kb on - strand, within EX28DRAFT_3957 at 167.148 kb on + strand, within EX28DRAFT_3957 at 167.166 kb on - strand, within EX28DRAFT_3957 at 167.673 kb on + strand at 167.883 kb on - strand at 167.940 kb on + strand, within EX28DRAFT_3958 at 167.940 kb on + strand, within EX28DRAFT_3958 at 168.056 kb on + strand at 168.056 kb on + strand at 168.134 kb on + strand, within EX28DRAFT_3959 at 168.157 kb on + strand, within EX28DRAFT_3959 at 168.157 kb on + strand, within EX28DRAFT_3959 at 168.158 kb on - strand, within EX28DRAFT_3959 at 168.158 kb on - strand, within EX28DRAFT_3959 at 168.158 kb on - strand, within EX28DRAFT_3959 at 168.158 kb on - strand, within EX28DRAFT_3959 at 168.222 kb on + strand, within EX28DRAFT_3959 at 168.272 kb on - strand at 168.289 kb on - strand at 168.289 kb on - strand at 168.289 kb on - strand at 168.303 kb on - strand at 168.334 kb on + strand, within EX28DRAFT_3960 at 168.334 kb on + strand, within EX28DRAFT_3960 at 168.358 kb on - strand, within EX28DRAFT_3960 at 168.423 kb on + strand, within EX28DRAFT_3960 at 168.528 kb on + strand, within EX28DRAFT_3960 at 168.541 kb on + strand, within EX28DRAFT_3960 at 168.664 kb on + strand, within EX28DRAFT_3960 at 168.681 kb on + strand, within EX28DRAFT_3960 at 168.824 kb on - strand at 168.824 kb on - strand at 168.889 kb on - strand, within EX28DRAFT_3961 at 168.937 kb on + strand, within EX28DRAFT_3961 at 168.938 kb on - strand, within EX28DRAFT_3961 at 168.938 kb on - strand, within EX28DRAFT_3961 at 169.000 kb on + strand, within EX28DRAFT_3961 at 169.000 kb on + strand, within EX28DRAFT_3961 at 169.001 kb on - strand, within EX28DRAFT_3961 at 169.011 kb on + strand, within EX28DRAFT_3961 at 169.011 kb on + strand, within EX28DRAFT_3961 at 169.011 kb on + strand, within EX28DRAFT_3961 at 169.012 kb on - strand, within EX28DRAFT_3961 at 169.035 kb on + strand, within EX28DRAFT_3961 at 169.036 kb on - strand, within EX28DRAFT_3961 at 169.036 kb on - strand, within EX28DRAFT_3961 at 169.049 kb on + strand, within EX28DRAFT_3961 at 169.205 kb on - strand, within EX28DRAFT_3961 at 169.205 kb on - strand, within EX28DRAFT_3961
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 167,086 + EX28DRAFT_3957 0.54 +0.4 167,087 - EX28DRAFT_3957 0.54 +0.2 167,148 + EX28DRAFT_3957 0.62 -0.1 167,166 - EX28DRAFT_3957 0.65 -0.3 167,673 + -1.1 167,883 - -0.2 167,940 + EX28DRAFT_3958 0.40 -0.4 167,940 + EX28DRAFT_3958 0.40 -0.2 168,056 + -1.0 168,056 + +0.0 168,134 + EX28DRAFT_3959 0.40 +0.2 168,157 + EX28DRAFT_3959 0.53 +0.0 168,157 + EX28DRAFT_3959 0.53 +0.1 168,158 - EX28DRAFT_3959 0.54 +0.0 168,158 - EX28DRAFT_3959 0.54 +0.4 168,158 - EX28DRAFT_3959 0.54 +1.6 168,158 - EX28DRAFT_3959 0.54 +0.4 168,222 + EX28DRAFT_3959 0.89 +0.1 168,272 - +0.0 168,289 - -0.3 168,289 - +0.5 168,289 - -0.3 168,303 - -0.2 168,334 + EX28DRAFT_3960 0.10 +0.4 168,334 + EX28DRAFT_3960 0.10 -0.1 168,358 - EX28DRAFT_3960 0.15 +0.4 168,423 + EX28DRAFT_3960 0.30 -0.3 168,528 + EX28DRAFT_3960 0.53 +0.3 168,541 + EX28DRAFT_3960 0.56 -1.2 168,664 + EX28DRAFT_3960 0.84 +0.1 168,681 + EX28DRAFT_3960 0.88 +2.0 168,824 - +0.7 168,824 - -0.3 168,889 - EX28DRAFT_3961 0.11 +0.1 168,937 + EX28DRAFT_3961 0.17 -0.1 168,938 - EX28DRAFT_3961 0.17 -0.5 168,938 - EX28DRAFT_3961 0.17 -0.2 169,000 + EX28DRAFT_3961 0.24 +0.6 169,000 + EX28DRAFT_3961 0.24 -0.9 169,001 - EX28DRAFT_3961 0.24 +0.5 169,011 + EX28DRAFT_3961 0.26 -0.1 169,011 + EX28DRAFT_3961 0.26 -0.0 169,011 + EX28DRAFT_3961 0.26 -0.5 169,012 - EX28DRAFT_3961 0.26 +0.1 169,035 + EX28DRAFT_3961 0.28 +1.6 169,036 - EX28DRAFT_3961 0.29 +0.2 169,036 - EX28DRAFT_3961 0.29 +0.8 169,049 + EX28DRAFT_3961 0.30 +0.4 169,205 - EX28DRAFT_3961 0.49 +0.3 169,205 - EX28DRAFT_3961 0.49 -0.5
Or see this region's nucleotide sequence