Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3648 and EX28DRAFT_3649 are separated by 239 nucleotides EX28DRAFT_3649 and EX28DRAFT_3650 are separated by 30 nucleotides EX28DRAFT_3650 and EX28DRAFT_3651 are separated by 12 nucleotides
EX28DRAFT_3648: EX28DRAFT_3648 - Organic solvent tolerance protein OstA, at 309,704 to 312,055
_3648
EX28DRAFT_3649: EX28DRAFT_3649 - DnaJ-domain-containing proteins 1, at 312,295 to 313,110
_3649
EX28DRAFT_3650: EX28DRAFT_3650 - pseudouridine synthase, RluA family, at 313,141 to 313,800
_3650
EX28DRAFT_3651: EX28DRAFT_3651 - Superfamily II DNA/RNA helicases, SNF2 family, at 313,813 to 316,719
_3651
Position (kb) 312
313
314 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 312.068 kb on - strand at 312.118 kb on - strand at 312.118 kb on - strand at 312.193 kb on + strand at 312.193 kb on + strand at 312.198 kb on + strand at 312.198 kb on + strand at 312.199 kb on - strand at 312.208 kb on + strand at 312.210 kb on + strand at 312.292 kb on + strand at 312.292 kb on + strand at 312.292 kb on + strand at 312.293 kb on - strand at 312.293 kb on - strand at 312.293 kb on - strand at 312.294 kb on + strand at 312.294 kb on + strand at 312.294 kb on + strand at 312.295 kb on - strand at 312.295 kb on - strand at 312.295 kb on - strand at 312.295 kb on - strand at 312.295 kb on - strand at 312.376 kb on - strand at 312.387 kb on + strand, within EX28DRAFT_3649 at 312.465 kb on + strand, within EX28DRAFT_3649 at 312.488 kb on + strand, within EX28DRAFT_3649 at 312.488 kb on + strand, within EX28DRAFT_3649 at 312.489 kb on - strand, within EX28DRAFT_3649 at 312.677 kb on + strand, within EX28DRAFT_3649 at 312.757 kb on + strand, within EX28DRAFT_3649 at 312.758 kb on - strand, within EX28DRAFT_3649 at 312.929 kb on + strand, within EX28DRAFT_3649 at 312.973 kb on - strand, within EX28DRAFT_3649 at 313.108 kb on + strand at 313.299 kb on + strand, within EX28DRAFT_3650 at 313.300 kb on - strand, within EX28DRAFT_3650 at 313.300 kb on - strand, within EX28DRAFT_3650 at 313.371 kb on - strand, within EX28DRAFT_3650 at 313.386 kb on - strand, within EX28DRAFT_3650 at 313.514 kb on + strand, within EX28DRAFT_3650 at 313.515 kb on - strand, within EX28DRAFT_3650 at 313.515 kb on - strand, within EX28DRAFT_3650 at 313.572 kb on + strand, within EX28DRAFT_3650 at 313.784 kb on + strand at 313.814 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 312,068 - -0.7 312,118 - +1.0 312,118 - -0.4 312,193 + -0.4 312,193 + -0.4 312,198 + +0.0 312,198 + -3.1 312,199 - -0.0 312,208 + +0.0 312,210 + +0.0 312,292 + -1.0 312,292 + -0.7 312,292 + +1.7 312,293 - -0.2 312,293 - -0.0 312,293 - -0.0 312,294 + -0.6 312,294 + -3.3 312,294 + -1.2 312,295 - +0.1 312,295 - +0.1 312,295 - -0.7 312,295 - +0.2 312,295 - -0.1 312,376 - +0.3 312,387 + EX28DRAFT_3649 0.11 -0.7 312,465 + EX28DRAFT_3649 0.21 +0.1 312,488 + EX28DRAFT_3649 0.24 -0.8 312,488 + EX28DRAFT_3649 0.24 +0.0 312,489 - EX28DRAFT_3649 0.24 +0.1 312,677 + EX28DRAFT_3649 0.47 +0.1 312,757 + EX28DRAFT_3649 0.57 -0.6 312,758 - EX28DRAFT_3649 0.57 -0.2 312,929 + EX28DRAFT_3649 0.78 +0.9 312,973 - EX28DRAFT_3649 0.83 -1.0 313,108 + -0.5 313,299 + EX28DRAFT_3650 0.24 +0.3 313,300 - EX28DRAFT_3650 0.24 -0.3 313,300 - EX28DRAFT_3650 0.24 -0.1 313,371 - EX28DRAFT_3650 0.35 +0.5 313,386 - EX28DRAFT_3650 0.37 +0.1 313,514 + EX28DRAFT_3650 0.57 -0.6 313,515 - EX28DRAFT_3650 0.57 -0.4 313,515 - EX28DRAFT_3650 0.57 -0.1 313,572 + EX28DRAFT_3650 0.65 -0.0 313,784 + +0.7 313,814 + -0.8
Or see this region's nucleotide sequence