Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3286 and EX28DRAFT_3287 are separated by 375 nucleotides EX28DRAFT_3287 and EX28DRAFT_3288 are separated by 111 nucleotides EX28DRAFT_3288 and EX28DRAFT_3289 are separated by 62 nucleotides EX28DRAFT_3289 and EX28DRAFT_3290 are separated by 45 nucleotides
EX28DRAFT_3286: EX28DRAFT_3286 - transcriptional regulator, ArgR family, at 584,115 to 584,585
_3286
EX28DRAFT_3287: EX28DRAFT_3287 - Protein of unknown function (DUF1471), at 584,961 to 585,224
_3287
EX28DRAFT_3288: EX28DRAFT_3288 - Protein of unknown function (DUF1471), at 585,336 to 585,602
_3288
EX28DRAFT_3289: EX28DRAFT_3289 - Barstar, RNAse (barnase) inhibitor, at 585,665 to 585,937
_3289
EX28DRAFT_3290: EX28DRAFT_3290 - succinate-semialdehyde dehydrogenase, at 585,983 to 587,437
_3290
Position (kb) 585
586 Strain fitness (log2 ratio) -2
-1
0
1 at 584.769 kb on + strand at 584.769 kb on + strand at 584.953 kb on + strand at 584.954 kb on - strand at 585.035 kb on + strand, within EX28DRAFT_3287 at 585.217 kb on - strand at 585.230 kb on - strand at 585.231 kb on - strand at 585.318 kb on + strand at 585.329 kb on - strand at 585.329 kb on - strand at 585.335 kb on + strand at 585.416 kb on - strand, within EX28DRAFT_3288 at 585.439 kb on + strand, within EX28DRAFT_3288 at 585.446 kb on + strand, within EX28DRAFT_3288 at 585.447 kb on - strand, within EX28DRAFT_3288 at 585.447 kb on - strand, within EX28DRAFT_3288 at 585.596 kb on + strand at 585.597 kb on - strand at 585.597 kb on - strand at 585.601 kb on - strand at 585.601 kb on - strand at 585.601 kb on - strand at 585.623 kb on + strand at 585.624 kb on - strand at 585.925 kb on + strand at 585.925 kb on + strand at 585.925 kb on + strand at 585.926 kb on - strand at 585.926 kb on - strand at 585.927 kb on + strand at 585.927 kb on + strand at 585.928 kb on - strand at 585.984 kb on + strand at 585.984 kb on + strand at 585.985 kb on - strand at 585.985 kb on - strand at 585.985 kb on - strand at 585.986 kb on + strand at 585.997 kb on + strand at 585.997 kb on + strand at 586.020 kb on + strand at 586.020 kb on + strand at 586.021 kb on - strand at 586.071 kb on - strand at 586.185 kb on + strand, within EX28DRAFT_3290 at 586.185 kb on + strand, within EX28DRAFT_3290 at 586.320 kb on - strand, within EX28DRAFT_3290 at 586.513 kb on + strand, within EX28DRAFT_3290
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 584,769 + +0.9 584,769 + +0.2 584,953 + -0.2 584,954 - -0.1 585,035 + EX28DRAFT_3287 0.28 +0.0 585,217 - -0.6 585,230 - -0.0 585,231 - -0.0 585,318 + +0.1 585,329 - -2.3 585,329 - +0.4 585,335 + +0.3 585,416 - EX28DRAFT_3288 0.30 +0.5 585,439 + EX28DRAFT_3288 0.39 +0.4 585,446 + EX28DRAFT_3288 0.41 -0.1 585,447 - EX28DRAFT_3288 0.42 +0.3 585,447 - EX28DRAFT_3288 0.42 -0.4 585,596 + +0.3 585,597 - -0.1 585,597 - +0.8 585,601 - +1.5 585,601 - +0.6 585,601 - +0.7 585,623 + -0.2 585,624 - -0.0 585,925 + +0.3 585,925 + +0.5 585,925 + +0.5 585,926 - +0.2 585,926 - -0.2 585,927 + +0.6 585,927 + +0.5 585,928 - +0.1 585,984 + -0.9 585,984 + +0.5 585,985 - -0.7 585,985 - +0.2 585,985 - +0.9 585,986 + -0.6 585,997 + -0.6 585,997 + +0.3 586,020 + -0.2 586,020 + +0.1 586,021 - +0.2 586,071 - -0.1 586,185 + EX28DRAFT_3290 0.14 -0.2 586,185 + EX28DRAFT_3290 0.14 -0.6 586,320 - EX28DRAFT_3290 0.23 +0.3 586,513 + EX28DRAFT_3290 0.36 -0.3
Or see this region's nucleotide sequence