Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3209 and EX28DRAFT_3210 are separated by 62 nucleotides EX28DRAFT_3210 and EX28DRAFT_3211 are separated by 142 nucleotides
EX28DRAFT_3209: EX28DRAFT_3209 - luciferase family oxidoreductase, group 1, at 507,414 to 508,421
_3209
EX28DRAFT_3210: EX28DRAFT_3210 - aromatic amino acid transport protein, at 508,484 to 509,728
_3210
EX28DRAFT_3211: EX28DRAFT_3211 - Superfamily II DNA and RNA helicases, at 509,871 to 511,766
_3211
Position (kb) 508
509
510 Strain fitness (log2 ratio) -1
0
1 at 507.566 kb on + strand, within EX28DRAFT_3209 at 507.566 kb on + strand, within EX28DRAFT_3209 at 507.567 kb on - strand, within EX28DRAFT_3209 at 507.567 kb on - strand, within EX28DRAFT_3209 at 507.623 kb on + strand, within EX28DRAFT_3209 at 507.624 kb on - strand, within EX28DRAFT_3209 at 507.624 kb on - strand, within EX28DRAFT_3209 at 507.624 kb on - strand, within EX28DRAFT_3209 at 507.736 kb on + strand, within EX28DRAFT_3209 at 508.083 kb on - strand, within EX28DRAFT_3209 at 508.131 kb on - strand, within EX28DRAFT_3209 at 508.233 kb on + strand, within EX28DRAFT_3209 at 508.334 kb on + strand at 508.334 kb on + strand at 508.334 kb on + strand at 508.492 kb on - strand at 508.616 kb on - strand, within EX28DRAFT_3210 at 508.625 kb on - strand, within EX28DRAFT_3210 at 508.625 kb on - strand, within EX28DRAFT_3210 at 508.661 kb on - strand, within EX28DRAFT_3210 at 508.661 kb on - strand, within EX28DRAFT_3210 at 508.692 kb on + strand, within EX28DRAFT_3210 at 508.693 kb on - strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.011 kb on - strand, within EX28DRAFT_3210 at 509.079 kb on + strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.258 kb on + strand, within EX28DRAFT_3210 at 509.261 kb on + strand, within EX28DRAFT_3210 at 509.430 kb on + strand, within EX28DRAFT_3210 at 509.430 kb on + strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.435 kb on + strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.523 kb on + strand, within EX28DRAFT_3210 at 509.841 kb on - strand at 509.843 kb on - strand at 509.853 kb on - strand at 509.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 507,566 + EX28DRAFT_3209 0.15 -0.3 507,566 + EX28DRAFT_3209 0.15 +0.7 507,567 - EX28DRAFT_3209 0.15 +0.4 507,567 - EX28DRAFT_3209 0.15 -0.6 507,623 + EX28DRAFT_3209 0.21 +0.3 507,624 - EX28DRAFT_3209 0.21 -0.2 507,624 - EX28DRAFT_3209 0.21 +0.5 507,624 - EX28DRAFT_3209 0.21 -0.4 507,736 + EX28DRAFT_3209 0.32 +0.3 508,083 - EX28DRAFT_3209 0.66 -0.3 508,131 - EX28DRAFT_3209 0.71 -0.1 508,233 + EX28DRAFT_3209 0.81 -0.2 508,334 + +0.8 508,334 + -0.7 508,334 + +1.2 508,492 - -0.5 508,616 - EX28DRAFT_3210 0.11 +0.3 508,625 - EX28DRAFT_3210 0.11 +0.7 508,625 - EX28DRAFT_3210 0.11 +0.5 508,661 - EX28DRAFT_3210 0.14 +0.3 508,661 - EX28DRAFT_3210 0.14 -0.3 508,692 + EX28DRAFT_3210 0.17 +0.7 508,693 - EX28DRAFT_3210 0.17 +0.1 509,010 + EX28DRAFT_3210 0.42 +0.1 509,010 + EX28DRAFT_3210 0.42 +0.6 509,010 + EX28DRAFT_3210 0.42 +0.9 509,011 - EX28DRAFT_3210 0.42 -0.6 509,079 + EX28DRAFT_3210 0.48 -0.0 509,080 - EX28DRAFT_3210 0.48 +0.3 509,080 - EX28DRAFT_3210 0.48 +0.2 509,080 - EX28DRAFT_3210 0.48 -0.5 509,258 + EX28DRAFT_3210 0.62 -0.2 509,261 + EX28DRAFT_3210 0.62 -1.1 509,430 + EX28DRAFT_3210 0.76 -0.8 509,430 + EX28DRAFT_3210 0.76 +0.2 509,431 - EX28DRAFT_3210 0.76 +0.2 509,431 - EX28DRAFT_3210 0.76 -0.3 509,431 - EX28DRAFT_3210 0.76 -0.1 509,435 + EX28DRAFT_3210 0.76 -0.8 509,436 - EX28DRAFT_3210 0.76 +0.3 509,436 - EX28DRAFT_3210 0.76 +1.6 509,436 - EX28DRAFT_3210 0.76 +0.0 509,523 + EX28DRAFT_3210 0.83 +0.3 509,841 - -0.4 509,843 - +0.3 509,853 - +0.6 509,866 - -0.0
Or see this region's nucleotide sequence