Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2539
Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MS_media with m-arsenite 1 mM |
---|---|---|---|---|---|
remove | |||||
2,570,900 | + | EX28DRAFT_2538 | 0.83 | +0.4 | |
2,570,923 | + | EX28DRAFT_2538 | 0.84 | -1.4 | |
2,571,017 | - | -0.5 | |||
2,571,020 | - | -0.1 | |||
2,571,043 | - | -0.1 | |||
2,571,445 | - | -0.7 | |||
2,571,446 | + | -0.2 | |||
2,571,486 | + | -0.7 | |||
2,571,487 | - | -1.6 | |||
2,571,691 | - | +2.3 | |||
2,571,863 | + | EX28DRAFT_2539 | 0.24 | +2.8 | |
2,571,863 | + | EX28DRAFT_2539 | 0.24 | +2.1 | |
2,571,864 | - | EX28DRAFT_2539 | 0.24 | +0.9 | |
2,571,866 | - | EX28DRAFT_2539 | 0.25 | +1.6 | |
2,571,920 | - | EX28DRAFT_2539 | 0.30 | +2.3 | |
2,572,012 | + | EX28DRAFT_2539 | 0.40 | +1.1 | |
2,572,238 | + | EX28DRAFT_2539 | 0.64 | +1.2 | |
2,572,239 | - | EX28DRAFT_2539 | 0.64 | +1.7 | |
2,572,247 | - | EX28DRAFT_2539 | 0.65 | +1.5 | |
2,572,247 | - | EX28DRAFT_2539 | 0.65 | +1.3 | |
2,572,537 | + | +1.7 | |||
2,573,232 | - | EX28DRAFT_2540 | 0.32 | +0.8 | |
2,573,280 | - | EX28DRAFT_2540 | 0.34 | +1.4 | |
2,573,312 | + | EX28DRAFT_2540 | 0.36 | +1.8 | |
2,573,418 | + | EX28DRAFT_2540 | 0.41 | +1.3 | |
2,573,418 | + | EX28DRAFT_2540 | 0.41 | +1.9 | |
2,573,419 | - | EX28DRAFT_2540 | 0.41 | +1.5 | |
2,573,458 | - | EX28DRAFT_2540 | 0.43 | +1.4 |
Or see this region's nucleotide sequence