Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2373 and EX28DRAFT_2374 are separated by 9 nucleotides EX28DRAFT_2374 and EX28DRAFT_2375 are separated by 188 nucleotides
EX28DRAFT_2373: EX28DRAFT_2373 - 2,3-dihydroxybenzoate-AMP ligase, at 2,392,563 to 2,394,173
_2373
EX28DRAFT_2374: EX28DRAFT_2374 - isochorismate synthase (EC 5.4.4.2), at 2,394,183 to 2,395,358
_2374
EX28DRAFT_2375: EX28DRAFT_2375 - ABC-type Fe2+-enterobactin transport system, periplasmic component, at 2,395,547 to 2,396,506
_2375
Position (kb)
2394
2395
2396 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2393.277 kb on - strand, within EX28DRAFT_2373 at 2393.468 kb on - strand, within EX28DRAFT_2373 at 2393.468 kb on - strand, within EX28DRAFT_2373 at 2393.468 kb on - strand, within EX28DRAFT_2373 at 2393.472 kb on - strand, within EX28DRAFT_2373 at 2393.472 kb on - strand, within EX28DRAFT_2373 at 2393.497 kb on + strand, within EX28DRAFT_2373 at 2393.548 kb on + strand, within EX28DRAFT_2373 at 2393.549 kb on - strand, within EX28DRAFT_2373 at 2393.915 kb on - strand, within EX28DRAFT_2373 at 2393.915 kb on - strand, within EX28DRAFT_2373 at 2394.158 kb on + strand at 2394.668 kb on + strand, within EX28DRAFT_2374 at 2394.690 kb on + strand, within EX28DRAFT_2374 at 2394.690 kb on + strand, within EX28DRAFT_2374 at 2394.690 kb on + strand, within EX28DRAFT_2374 at 2394.691 kb on - strand, within EX28DRAFT_2374 at 2395.037 kb on - strand, within EX28DRAFT_2374 at 2395.269 kb on - strand at 2395.289 kb on + strand at 2395.290 kb on - strand at 2395.290 kb on - strand at 2395.425 kb on - strand at 2395.461 kb on + strand at 2395.461 kb on + strand at 2395.462 kb on - strand at 2395.467 kb on - strand at 2395.585 kb on - strand at 2395.585 kb on - strand at 2395.819 kb on + strand, within EX28DRAFT_2375 at 2395.851 kb on - strand, within EX28DRAFT_2375 at 2396.219 kb on - strand, within EX28DRAFT_2375 at 2396.281 kb on + strand, within EX28DRAFT_2375
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,393,277 - EX28DRAFT_2373 0.44 -0.6 2,393,468 - EX28DRAFT_2373 0.56 -4.7 2,393,468 - EX28DRAFT_2373 0.56 -0.2 2,393,468 - EX28DRAFT_2373 0.56 +0.1 2,393,472 - EX28DRAFT_2373 0.56 -1.2 2,393,472 - EX28DRAFT_2373 0.56 +0.8 2,393,497 + EX28DRAFT_2373 0.58 -0.6 2,393,548 + EX28DRAFT_2373 0.61 +0.1 2,393,549 - EX28DRAFT_2373 0.61 +1.3 2,393,915 - EX28DRAFT_2373 0.84 +0.4 2,393,915 - EX28DRAFT_2373 0.84 -0.0 2,394,158 + +0.4 2,394,668 + EX28DRAFT_2374 0.41 -0.1 2,394,690 + EX28DRAFT_2374 0.43 -0.4 2,394,690 + EX28DRAFT_2374 0.43 -0.0 2,394,690 + EX28DRAFT_2374 0.43 +1.0 2,394,691 - EX28DRAFT_2374 0.43 +0.9 2,395,037 - EX28DRAFT_2374 0.73 +0.2 2,395,269 - +0.0 2,395,289 + +0.1 2,395,290 - -0.7 2,395,290 - -0.9 2,395,425 - -0.7 2,395,461 + +0.0 2,395,461 + -0.5 2,395,462 - +0.1 2,395,467 - -0.3 2,395,585 - -0.2 2,395,585 - +0.3 2,395,819 + EX28DRAFT_2375 0.28 +0.1 2,395,851 - EX28DRAFT_2375 0.32 -1.2 2,396,219 - EX28DRAFT_2375 0.70 -0.2 2,396,281 + EX28DRAFT_2375 0.76 +0.3
Or see this region's nucleotide sequence