Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2310 and EX28DRAFT_2311 are separated by 163 nucleotides EX28DRAFT_2311 and EX28DRAFT_2312 overlap by 4 nucleotides EX28DRAFT_2312 and EX28DRAFT_2313 are separated by 44 nucleotides
EX28DRAFT_2310: EX28DRAFT_2310 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 2,335,058 to 2,336,482
_2310
EX28DRAFT_2311: EX28DRAFT_2311 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 2,336,646 to 2,337,692
_2311
EX28DRAFT_2312: EX28DRAFT_2312 - probable rRNA maturation factor YbeY, at 2,337,689 to 2,338,156
_2312
EX28DRAFT_2313: EX28DRAFT_2313 - Putative Mg2+ and Co2+ transporter CorC, at 2,338,201 to 2,339,124
_2313
Position (kb)
2336
2337
2338 Strain fitness (log2 ratio)
-2
-1
0
1 at 2335.749 kb on + strand, within EX28DRAFT_2310 at 2335.750 kb on - strand, within EX28DRAFT_2310 at 2335.750 kb on - strand, within EX28DRAFT_2310 at 2335.750 kb on - strand, within EX28DRAFT_2310 at 2335.811 kb on + strand, within EX28DRAFT_2310 at 2335.913 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.145 kb on - strand, within EX28DRAFT_2310 at 2336.160 kb on + strand, within EX28DRAFT_2310 at 2336.161 kb on + strand, within EX28DRAFT_2310 at 2336.161 kb on + strand, within EX28DRAFT_2310 at 2336.161 kb on + strand, within EX28DRAFT_2310 at 2336.162 kb on - strand, within EX28DRAFT_2310 at 2336.195 kb on - strand, within EX28DRAFT_2310 at 2336.404 kb on + strand at 2336.405 kb on - strand at 2336.481 kb on - strand at 2336.515 kb on - strand at 2336.515 kb on - strand at 2336.537 kb on - strand at 2336.653 kb on + strand at 2336.654 kb on - strand at 2336.844 kb on + strand, within EX28DRAFT_2311 at 2336.844 kb on + strand, within EX28DRAFT_2311 at 2336.852 kb on + strand, within EX28DRAFT_2311 at 2337.027 kb on + strand, within EX28DRAFT_2311 at 2337.093 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.428 kb on + strand, within EX28DRAFT_2311 at 2337.635 kb on + strand at 2337.659 kb on + strand at 2338.220 kb on + strand at 2338.287 kb on + strand at 2338.404 kb on + strand, within EX28DRAFT_2313 at 2338.405 kb on - strand, within EX28DRAFT_2313 at 2338.405 kb on - strand, within EX28DRAFT_2313 at 2338.662 kb on - strand, within EX28DRAFT_2313
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,335,749 + EX28DRAFT_2310 0.48 +0.4 2,335,750 - EX28DRAFT_2310 0.49 -1.1 2,335,750 - EX28DRAFT_2310 0.49 +0.6 2,335,750 - EX28DRAFT_2310 0.49 -0.8 2,335,811 + EX28DRAFT_2310 0.53 -0.3 2,335,913 + EX28DRAFT_2310 0.60 +0.5 2,336,144 + EX28DRAFT_2310 0.76 -0.4 2,336,144 + EX28DRAFT_2310 0.76 +0.6 2,336,144 + EX28DRAFT_2310 0.76 +0.9 2,336,144 + EX28DRAFT_2310 0.76 +0.1 2,336,145 - EX28DRAFT_2310 0.76 +0.6 2,336,160 + EX28DRAFT_2310 0.77 -0.5 2,336,161 + EX28DRAFT_2310 0.77 +0.2 2,336,161 + EX28DRAFT_2310 0.77 -2.4 2,336,161 + EX28DRAFT_2310 0.77 -0.1 2,336,162 - EX28DRAFT_2310 0.77 +0.1 2,336,195 - EX28DRAFT_2310 0.80 -0.2 2,336,404 + -0.1 2,336,405 - +0.8 2,336,481 - +1.2 2,336,515 - -0.1 2,336,515 - +0.2 2,336,537 - +0.0 2,336,653 + -1.1 2,336,654 - -0.1 2,336,844 + EX28DRAFT_2311 0.19 +0.7 2,336,844 + EX28DRAFT_2311 0.19 -0.3 2,336,852 + EX28DRAFT_2311 0.20 -0.1 2,337,027 + EX28DRAFT_2311 0.36 -0.2 2,337,093 + EX28DRAFT_2311 0.43 -0.2 2,337,327 + EX28DRAFT_2311 0.65 -0.6 2,337,327 + EX28DRAFT_2311 0.65 -0.3 2,337,327 + EX28DRAFT_2311 0.65 -1.6 2,337,428 + EX28DRAFT_2311 0.75 -0.6 2,337,635 + -0.1 2,337,659 + -0.0 2,338,220 + -0.3 2,338,287 + -2.3 2,338,404 + EX28DRAFT_2313 0.22 +0.5 2,338,405 - EX28DRAFT_2313 0.22 +0.3 2,338,405 - EX28DRAFT_2313 0.22 +1.2 2,338,662 - EX28DRAFT_2313 0.50 -0.4
Or see this region's nucleotide sequence