Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2129 and EX28DRAFT_2130 are separated by 107 nucleotides EX28DRAFT_2130 and EX28DRAFT_2131 are separated by 216 nucleotides
EX28DRAFT_2129: EX28DRAFT_2129 - Glucose/sorbosone dehydrogenases, at 2,147,524 to 2,148,642
_2129
EX28DRAFT_2130: EX28DRAFT_2130 - Biofilm formation protein (YliH/bssR), at 2,148,750 to 2,149,133
_2130
EX28DRAFT_2131: EX28DRAFT_2131 - ribosomal protein S12 methylthiotransferase RimO, at 2,149,350 to 2,150,675
_2131
Position (kb)
2148
2149
2150 Strain fitness (log2 ratio)
-1
0
1
2 at 2147.861 kb on + strand, within EX28DRAFT_2129 at 2147.861 kb on + strand, within EX28DRAFT_2129 at 2147.862 kb on - strand, within EX28DRAFT_2129 at 2147.866 kb on - strand, within EX28DRAFT_2129 at 2147.894 kb on + strand, within EX28DRAFT_2129 at 2148.112 kb on - strand, within EX28DRAFT_2129 at 2148.141 kb on + strand, within EX28DRAFT_2129 at 2148.265 kb on - strand, within EX28DRAFT_2129 at 2148.504 kb on + strand, within EX28DRAFT_2129 at 2148.505 kb on - strand, within EX28DRAFT_2129 at 2148.642 kb on + strand at 2148.671 kb on - strand at 2148.719 kb on - strand at 2148.883 kb on - strand, within EX28DRAFT_2130 at 2149.034 kb on + strand, within EX28DRAFT_2130 at 2149.034 kb on + strand, within EX28DRAFT_2130 at 2149.035 kb on - strand, within EX28DRAFT_2130 at 2149.035 kb on - strand, within EX28DRAFT_2130 at 2149.035 kb on - strand, within EX28DRAFT_2130 at 2149.036 kb on + strand, within EX28DRAFT_2130 at 2149.037 kb on - strand, within EX28DRAFT_2130 at 2149.037 kb on - strand, within EX28DRAFT_2130 at 2149.037 kb on - strand, within EX28DRAFT_2130 at 2149.164 kb on + strand at 2149.233 kb on - strand at 2149.236 kb on + strand at 2149.237 kb on - strand at 2149.237 kb on - strand at 2149.282 kb on + strand at 2149.283 kb on - strand at 2149.283 kb on - strand at 2149.283 kb on - strand at 2149.284 kb on + strand at 2149.284 kb on + strand at 2149.285 kb on - strand at 2149.285 kb on - strand at 2149.298 kb on + strand at 2149.305 kb on + strand at 2149.330 kb on - strand at 2149.474 kb on - strand at 2149.695 kb on + strand, within EX28DRAFT_2131 at 2149.695 kb on + strand, within EX28DRAFT_2131 at 2149.777 kb on - strand, within EX28DRAFT_2131 at 2149.777 kb on - strand, within EX28DRAFT_2131 at 2149.777 kb on - strand, within EX28DRAFT_2131 at 2150.059 kb on - strand, within EX28DRAFT_2131
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,147,861 + EX28DRAFT_2129 0.30 +0.4 2,147,861 + EX28DRAFT_2129 0.30 +0.7 2,147,862 - EX28DRAFT_2129 0.30 +0.2 2,147,866 - EX28DRAFT_2129 0.31 -0.0 2,147,894 + EX28DRAFT_2129 0.33 -0.1 2,148,112 - EX28DRAFT_2129 0.53 -0.5 2,148,141 + EX28DRAFT_2129 0.55 -1.4 2,148,265 - EX28DRAFT_2129 0.66 +0.0 2,148,504 + EX28DRAFT_2129 0.88 +0.2 2,148,505 - EX28DRAFT_2129 0.88 +0.4 2,148,642 + -0.5 2,148,671 - -1.1 2,148,719 - -0.7 2,148,883 - EX28DRAFT_2130 0.35 -0.5 2,149,034 + EX28DRAFT_2130 0.74 -0.6 2,149,034 + EX28DRAFT_2130 0.74 -0.1 2,149,035 - EX28DRAFT_2130 0.74 -1.2 2,149,035 - EX28DRAFT_2130 0.74 -0.0 2,149,035 - EX28DRAFT_2130 0.74 -1.0 2,149,036 + EX28DRAFT_2130 0.74 -0.0 2,149,037 - EX28DRAFT_2130 0.75 +0.0 2,149,037 - EX28DRAFT_2130 0.75 -0.4 2,149,037 - EX28DRAFT_2130 0.75 -1.6 2,149,164 + -0.3 2,149,233 - +0.3 2,149,236 + +0.1 2,149,237 - -0.3 2,149,237 - -0.1 2,149,282 + -0.5 2,149,283 - +0.7 2,149,283 - +0.4 2,149,283 - -0.1 2,149,284 + -0.1 2,149,284 + +0.2 2,149,285 - -0.5 2,149,285 - +1.9 2,149,298 + -1.6 2,149,305 + +0.2 2,149,330 - -0.2 2,149,474 - -0.3 2,149,695 + EX28DRAFT_2131 0.26 +0.2 2,149,695 + EX28DRAFT_2131 0.26 -0.1 2,149,777 - EX28DRAFT_2131 0.32 -0.3 2,149,777 - EX28DRAFT_2131 0.32 +0.1 2,149,777 - EX28DRAFT_2131 0.32 +0.1 2,150,059 - EX28DRAFT_2131 0.53 -1.7
Or see this region's nucleotide sequence