Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1697 and EX28DRAFT_1698 are separated by 209 nucleotides EX28DRAFT_1698 and EX28DRAFT_1699 are separated by 166 nucleotides EX28DRAFT_1699 and EX28DRAFT_1700 are separated by 38 nucleotides
EX28DRAFT_1697: EX28DRAFT_1697 - Predicted permease, at 1,710,341 to 1,711,456
_1697
EX28DRAFT_1698: EX28DRAFT_1698 - RNA, at 1,711,666 to 1,711,773
_1698
EX28DRAFT_1699: EX28DRAFT_1699 - hypothetical protein, at 1,711,940 to 1,712,092
_1699
EX28DRAFT_1700: EX28DRAFT_1700 - hypothetical protein, at 1,712,131 to 1,713,297
_1700
Position (kb) 1711
1712 Strain fitness (log2 ratio) -1
0
1 at 1710.710 kb on + strand, within EX28DRAFT_1697 at 1710.892 kb on - strand, within EX28DRAFT_1697 at 1711.082 kb on - strand, within EX28DRAFT_1697 at 1711.138 kb on + strand, within EX28DRAFT_1697 at 1711.203 kb on + strand, within EX28DRAFT_1697 at 1711.204 kb on - strand, within EX28DRAFT_1697 at 1711.581 kb on - strand at 1711.584 kb on - strand at 1711.660 kb on + strand at 1711.661 kb on - strand at 1711.661 kb on - strand at 1711.691 kb on + strand, within EX28DRAFT_1698 at 1711.692 kb on - strand, within EX28DRAFT_1698 at 1711.693 kb on + strand, within EX28DRAFT_1698 at 1711.820 kb on + strand at 1711.900 kb on - strand at 1711.999 kb on + strand, within EX28DRAFT_1699 at 1711.999 kb on + strand, within EX28DRAFT_1699 at 1712.000 kb on - strand, within EX28DRAFT_1699 at 1712.000 kb on - strand, within EX28DRAFT_1699 at 1712.122 kb on - strand at 1712.214 kb on - strand at 1712.530 kb on - strand, within EX28DRAFT_1700
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,710,710 + EX28DRAFT_1697 0.33 +0.2 1,710,892 - EX28DRAFT_1697 0.49 +0.5 1,711,082 - EX28DRAFT_1697 0.66 +0.8 1,711,138 + EX28DRAFT_1697 0.71 +0.2 1,711,203 + EX28DRAFT_1697 0.77 +0.3 1,711,204 - EX28DRAFT_1697 0.77 +0.0 1,711,581 - -1.3 1,711,584 - -0.0 1,711,660 + +0.3 1,711,661 - +0.0 1,711,661 - +1.3 1,711,691 + EX28DRAFT_1698 0.23 -0.5 1,711,692 - EX28DRAFT_1698 0.24 +0.1 1,711,693 + EX28DRAFT_1698 0.25 -0.1 1,711,820 + -0.2 1,711,900 - +0.1 1,711,999 + EX28DRAFT_1699 0.39 +0.4 1,711,999 + EX28DRAFT_1699 0.39 -0.3 1,712,000 - EX28DRAFT_1699 0.39 +0.7 1,712,000 - EX28DRAFT_1699 0.39 +1.5 1,712,122 - +0.1 1,712,214 - +0.7 1,712,530 - EX28DRAFT_1700 0.34 -0.4
Or see this region's nucleotide sequence