Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0830 and EX28DRAFT_0831 overlap by 1 nucleotides EX28DRAFT_0831 and EX28DRAFT_0832 overlap by 4 nucleotides EX28DRAFT_0832 and EX28DRAFT_0833 are separated by 3 nucleotides EX28DRAFT_0833 and EX28DRAFT_0834 are separated by 36 nucleotides
EX28DRAFT_0830: EX28DRAFT_0830 - peptide chain release factor 1, at 834,590 to 835,672
_0830
EX28DRAFT_0831: EX28DRAFT_0831 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 835,672 to 836,502
_0831
EX28DRAFT_0832: EX28DRAFT_0832 - Uncharacterized protein conserved in bacteria, at 836,499 to 836,891
_0832
EX28DRAFT_0833: EX28DRAFT_0833 - Uncharacterized conserved protein, at 836,895 to 837,704
_0833
EX28DRAFT_0834: EX28DRAFT_0834 - 3-deoxy-8-phosphooctulonate synthase, at 837,741 to 838,595
_0834
Position (kb) 836
837 Strain fitness (log2 ratio) -2
-1
0
1 at 835.631 kb on + strand at 836.093 kb on + strand, within EX28DRAFT_0831 at 836.691 kb on + strand, within EX28DRAFT_0832 at 836.703 kb on - strand, within EX28DRAFT_0832 at 836.703 kb on - strand, within EX28DRAFT_0832 at 836.703 kb on - strand, within EX28DRAFT_0832 at 836.703 kb on - strand, within EX28DRAFT_0832 at 836.751 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 836.844 kb on + strand, within EX28DRAFT_0832 at 837.166 kb on + strand, within EX28DRAFT_0833 at 837.203 kb on + strand, within EX28DRAFT_0833 at 837.344 kb on + strand, within EX28DRAFT_0833 at 837.344 kb on + strand, within EX28DRAFT_0833 at 837.344 kb on + strand, within EX28DRAFT_0833 at 837.567 kb on + strand, within EX28DRAFT_0833
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 835,631 + +0.2 836,093 + EX28DRAFT_0831 0.51 +0.7 836,691 + EX28DRAFT_0832 0.49 -0.4 836,703 - EX28DRAFT_0832 0.52 -0.0 836,703 - EX28DRAFT_0832 0.52 -0.1 836,703 - EX28DRAFT_0832 0.52 +0.5 836,703 - EX28DRAFT_0832 0.52 -0.0 836,751 + EX28DRAFT_0832 0.64 +0.1 836,844 + EX28DRAFT_0832 0.88 -0.5 836,844 + EX28DRAFT_0832 0.88 -0.4 836,844 + EX28DRAFT_0832 0.88 -2.4 836,844 + EX28DRAFT_0832 0.88 +0.2 836,844 + EX28DRAFT_0832 0.88 -1.1 836,844 + EX28DRAFT_0832 0.88 -0.3 836,844 + EX28DRAFT_0832 0.88 -0.2 837,166 + EX28DRAFT_0833 0.33 +1.0 837,203 + EX28DRAFT_0833 0.38 +0.6 837,344 + EX28DRAFT_0833 0.55 +0.2 837,344 + EX28DRAFT_0833 0.55 +0.8 837,344 + EX28DRAFT_0833 0.55 -1.1 837,567 + EX28DRAFT_0833 0.83 -0.4
Or see this region's nucleotide sequence