Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0761 and EX28DRAFT_0762 are separated by 123 nucleotides EX28DRAFT_0762 and EX28DRAFT_0763 are separated by 143 nucleotides EX28DRAFT_0763 and EX28DRAFT_0764 are separated by 200 nucleotides EX28DRAFT_0764 and EX28DRAFT_0765 are separated by 69 nucleotides
EX28DRAFT_0761: EX28DRAFT_0761 - Uncharacterized conserved protein, at 756,972 to 757,412
_0761
EX28DRAFT_0762: EX28DRAFT_0762 - Disulfide bond formation protein DsbB, at 757,536 to 758,066
_0762
EX28DRAFT_0763: EX28DRAFT_0763 - Na+/H+ antiporter NhaB, at 758,210 to 759,748
_0763
EX28DRAFT_0764: EX28DRAFT_0764 - fatty acid metabolism transcriptional regulator FadR, at 759,949 to 760,668
_0764
EX28DRAFT_0765: EX28DRAFT_0765 - Uncharacterized conserved protein, at 760,738 to 762,270
_0765
Position (kb) 758
759
760 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 757.238 kb on + strand, within EX28DRAFT_0761 at 757.238 kb on + strand, within EX28DRAFT_0761 at 757.248 kb on + strand, within EX28DRAFT_0761 at 757.331 kb on + strand, within EX28DRAFT_0761 at 757.331 kb on + strand, within EX28DRAFT_0761 at 757.537 kb on + strand at 757.935 kb on - strand, within EX28DRAFT_0762 at 758.067 kb on - strand at 758.089 kb on + strand at 758.089 kb on + strand at 758.090 kb on - strand at 758.144 kb on - strand at 758.150 kb on + strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.207 kb on - strand at 758.225 kb on + strand at 758.225 kb on + strand at 758.225 kb on + strand at 758.227 kb on + strand at 758.228 kb on - strand at 758.238 kb on - strand at 758.266 kb on + strand at 758.308 kb on + strand at 758.308 kb on + strand at 758.310 kb on + strand at 758.351 kb on + strand at 758.352 kb on - strand at 758.352 kb on - strand at 758.352 kb on - strand at 758.609 kb on + strand, within EX28DRAFT_0763 at 758.612 kb on + strand, within EX28DRAFT_0763 at 758.612 kb on + strand, within EX28DRAFT_0763 at 758.613 kb on - strand, within EX28DRAFT_0763 at 758.613 kb on - strand, within EX28DRAFT_0763 at 758.623 kb on + strand, within EX28DRAFT_0763 at 758.862 kb on - strand, within EX28DRAFT_0763 at 759.255 kb on + strand, within EX28DRAFT_0763 at 759.260 kb on - strand, within EX28DRAFT_0763 at 759.260 kb on - strand, within EX28DRAFT_0763 at 759.264 kb on + strand, within EX28DRAFT_0763 at 759.429 kb on + strand, within EX28DRAFT_0763 at 759.429 kb on + strand, within EX28DRAFT_0763 at 759.429 kb on + strand, within EX28DRAFT_0763 at 759.678 kb on - strand at 759.686 kb on - strand at 759.771 kb on + strand at 759.787 kb on + strand at 759.787 kb on + strand at 759.787 kb on + strand at 759.831 kb on - strand at 759.881 kb on + strand at 759.905 kb on - strand at 759.923 kb on + strand at 759.958 kb on - strand at 759.991 kb on + strand at 760.384 kb on + strand, within EX28DRAFT_0764 at 760.462 kb on + strand, within EX28DRAFT_0764 at 760.525 kb on + strand, within EX28DRAFT_0764 at 760.525 kb on + strand, within EX28DRAFT_0764 at 760.526 kb on - strand, within EX28DRAFT_0764 at 760.530 kb on + strand, within EX28DRAFT_0764 at 760.740 kb on - strand at 760.747 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 757,238 + EX28DRAFT_0761 0.60 +0.2 757,238 + EX28DRAFT_0761 0.60 +0.4 757,248 + EX28DRAFT_0761 0.63 -1.1 757,331 + EX28DRAFT_0761 0.81 +0.3 757,331 + EX28DRAFT_0761 0.81 -0.1 757,537 + -0.7 757,935 - EX28DRAFT_0762 0.75 -2.1 758,067 - -1.2 758,089 + -2.6 758,089 + +1.0 758,090 - +0.3 758,144 - -0.3 758,150 + +0.1 758,207 - +0.3 758,207 - +0.9 758,207 - +0.3 758,207 - +0.3 758,207 - -0.4 758,207 - -0.2 758,207 - -0.4 758,207 - +0.3 758,207 - -0.4 758,225 + -0.1 758,225 + +0.3 758,225 + +0.3 758,227 + +0.2 758,228 - +0.8 758,238 - +0.4 758,266 + -1.1 758,308 + +0.7 758,308 + -0.0 758,310 + +0.3 758,351 + +0.4 758,352 - +1.5 758,352 - +0.9 758,352 - +1.0 758,609 + EX28DRAFT_0763 0.26 +0.1 758,612 + EX28DRAFT_0763 0.26 -0.1 758,612 + EX28DRAFT_0763 0.26 -0.2 758,613 - EX28DRAFT_0763 0.26 +0.3 758,613 - EX28DRAFT_0763 0.26 -0.1 758,623 + EX28DRAFT_0763 0.27 +0.1 758,862 - EX28DRAFT_0763 0.42 +0.5 759,255 + EX28DRAFT_0763 0.68 -0.1 759,260 - EX28DRAFT_0763 0.68 +0.2 759,260 - EX28DRAFT_0763 0.68 +0.6 759,264 + EX28DRAFT_0763 0.68 +0.5 759,429 + EX28DRAFT_0763 0.79 +0.2 759,429 + EX28DRAFT_0763 0.79 -0.7 759,429 + EX28DRAFT_0763 0.79 +0.6 759,678 - +0.3 759,686 - -0.2 759,771 + +0.3 759,787 + +0.1 759,787 + -0.1 759,787 + -0.4 759,831 - -1.2 759,881 + -0.0 759,905 - -2.0 759,923 + -0.6 759,958 - -1.8 759,991 + -5.1 760,384 + EX28DRAFT_0764 0.60 -1.3 760,462 + EX28DRAFT_0764 0.71 -1.1 760,525 + EX28DRAFT_0764 0.80 -3.2 760,525 + EX28DRAFT_0764 0.80 +0.6 760,526 - EX28DRAFT_0764 0.80 -2.0 760,530 + EX28DRAFT_0764 0.81 -1.9 760,740 - +0.8 760,747 - -0.3
Or see this region's nucleotide sequence