Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0683 and EX28DRAFT_0684 are separated by 239 nucleotides EX28DRAFT_0684 and EX28DRAFT_0685 are separated by 78 nucleotides EX28DRAFT_0685 and EX28DRAFT_0686 are separated by 189 nucleotides
EX28DRAFT_0683: EX28DRAFT_0683 - arginyl-tRNA synthetase (EC 6.1.1.19), at 681,352 to 683,085
_0683
EX28DRAFT_0684: EX28DRAFT_0684 - Uncharacterized protein conserved in bacteria, at 683,325 to 683,885
_0684
EX28DRAFT_0685: EX28DRAFT_0685 - Uncharacterized protein involved in copper resistance, at 683,964 to 684,707
_0685
EX28DRAFT_0686: EX28DRAFT_0686 - tRNA (mo5U34)-methyltransferase, at 684,897 to 685,868
_0686
Position (kb) 683
684
685 Strain fitness (log2 ratio) -1
0
1 at 683.224 kb on + strand at 683.224 kb on + strand at 683.225 kb on - strand at 683.225 kb on - strand at 683.230 kb on + strand at 683.245 kb on - strand at 683.287 kb on + strand at 683.360 kb on + strand at 683.737 kb on + strand, within EX28DRAFT_0684 at 683.883 kb on + strand at 683.962 kb on - strand at 683.989 kb on - strand at 684.082 kb on - strand, within EX28DRAFT_0685 at 684.162 kb on + strand, within EX28DRAFT_0685 at 684.338 kb on + strand, within EX28DRAFT_0685 at 684.339 kb on - strand, within EX28DRAFT_0685 at 684.479 kb on - strand, within EX28DRAFT_0685 at 684.572 kb on - strand, within EX28DRAFT_0685 at 684.713 kb on + strand at 684.746 kb on - strand at 684.809 kb on + strand at 685.271 kb on - strand, within EX28DRAFT_0686 at 685.493 kb on + strand, within EX28DRAFT_0686 at 685.494 kb on - strand, within EX28DRAFT_0686 at 685.494 kb on - strand, within EX28DRAFT_0686
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 683,224 + -0.2 683,224 + +0.0 683,225 - +0.6 683,225 - +0.0 683,230 + -0.2 683,245 - +0.3 683,287 + +1.3 683,360 + +0.4 683,737 + EX28DRAFT_0684 0.73 -0.3 683,883 + +0.5 683,962 - -0.1 683,989 - -0.1 684,082 - EX28DRAFT_0685 0.16 -0.5 684,162 + EX28DRAFT_0685 0.27 -0.1 684,338 + EX28DRAFT_0685 0.50 +0.2 684,339 - EX28DRAFT_0685 0.50 -1.1 684,479 - EX28DRAFT_0685 0.69 -0.6 684,572 - EX28DRAFT_0685 0.82 -0.1 684,713 + -0.2 684,746 - +0.2 684,809 + +0.3 685,271 - EX28DRAFT_0686 0.38 -0.6 685,493 + EX28DRAFT_0686 0.61 -0.9 685,494 - EX28DRAFT_0686 0.61 -1.2 685,494 - EX28DRAFT_0686 0.61 +0.0
Or see this region's nucleotide sequence