Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0530 and EX28DRAFT_0531 are separated by 52 nucleotides EX28DRAFT_0531 and EX28DRAFT_0532 are separated by 192 nucleotides
EX28DRAFT_0530: EX28DRAFT_0530 - nucleotide sugar dehydrogenase, at 524,652 to 525,818
_0530
EX28DRAFT_0531: EX28DRAFT_0531 - Nucleoside-diphosphate-sugar epimerases, at 525,871 to 526,875
_0531
EX28DRAFT_0532: EX28DRAFT_0532 - Chain length determinant protein, at 527,068 to 528,048
_0532
Position (kb) 525
526
527 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 525.960 kb on - strand at 526.103 kb on + strand, within EX28DRAFT_0531 at 526.176 kb on + strand, within EX28DRAFT_0531 at 526.177 kb on - strand, within EX28DRAFT_0531 at 526.195 kb on - strand, within EX28DRAFT_0531 at 526.220 kb on + strand, within EX28DRAFT_0531 at 526.221 kb on - strand, within EX28DRAFT_0531 at 526.248 kb on - strand, within EX28DRAFT_0531 at 526.251 kb on + strand, within EX28DRAFT_0531 at 526.253 kb on + strand, within EX28DRAFT_0531 at 526.290 kb on + strand, within EX28DRAFT_0531 at 526.291 kb on - strand, within EX28DRAFT_0531 at 526.296 kb on + strand, within EX28DRAFT_0531 at 526.331 kb on + strand, within EX28DRAFT_0531 at 526.371 kb on - strand, within EX28DRAFT_0531 at 526.371 kb on - strand, within EX28DRAFT_0531 at 526.383 kb on - strand, within EX28DRAFT_0531 at 526.489 kb on + strand, within EX28DRAFT_0531 at 526.793 kb on - strand at 526.929 kb on + strand at 526.930 kb on - strand at 526.935 kb on - strand at 526.975 kb on + strand at 526.976 kb on - strand at 526.976 kb on - strand at 527.013 kb on + strand at 527.013 kb on + strand at 527.014 kb on - strand at 527.014 kb on - strand at 527.014 kb on - strand at 527.014 kb on - strand at 527.014 kb on - strand at 527.015 kb on + strand at 527.015 kb on + strand at 527.015 kb on + strand at 527.015 kb on + strand at 527.015 kb on + strand at 527.015 kb on + strand at 527.015 kb on + strand at 527.016 kb on - strand at 527.016 kb on - strand at 527.016 kb on - strand at 527.020 kb on + strand at 527.020 kb on + strand at 527.021 kb on - strand at 527.030 kb on + strand at 527.033 kb on + strand at 527.034 kb on - strand at 527.034 kb on - strand at 527.068 kb on - strand at 527.127 kb on - strand at 527.135 kb on + strand at 527.190 kb on + strand, within EX28DRAFT_0532 at 527.213 kb on + strand, within EX28DRAFT_0532 at 527.284 kb on + strand, within EX28DRAFT_0532 at 527.285 kb on - strand, within EX28DRAFT_0532 at 527.285 kb on - strand, within EX28DRAFT_0532 at 527.365 kb on - strand, within EX28DRAFT_0532 at 527.412 kb on - strand, within EX28DRAFT_0532 at 527.424 kb on + strand, within EX28DRAFT_0532 at 527.476 kb on - strand, within EX28DRAFT_0532 at 527.518 kb on + strand, within EX28DRAFT_0532 at 527.518 kb on + strand, within EX28DRAFT_0532 at 527.615 kb on + strand, within EX28DRAFT_0532 at 527.735 kb on + strand, within EX28DRAFT_0532 at 527.735 kb on + strand, within EX28DRAFT_0532 at 527.830 kb on + strand, within EX28DRAFT_0532 at 527.874 kb on - strand, within EX28DRAFT_0532 at 527.874 kb on - strand, within EX28DRAFT_0532
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 525,960 - -1.3 526,103 + EX28DRAFT_0531 0.23 -0.7 526,176 + EX28DRAFT_0531 0.30 -1.5 526,177 - EX28DRAFT_0531 0.30 -1.7 526,195 - EX28DRAFT_0531 0.32 -2.4 526,220 + EX28DRAFT_0531 0.35 -1.2 526,221 - EX28DRAFT_0531 0.35 -2.2 526,248 - EX28DRAFT_0531 0.38 -3.7 526,251 + EX28DRAFT_0531 0.38 -1.8 526,253 + EX28DRAFT_0531 0.38 -2.6 526,290 + EX28DRAFT_0531 0.42 -1.9 526,291 - EX28DRAFT_0531 0.42 -1.5 526,296 + EX28DRAFT_0531 0.42 -1.1 526,331 + EX28DRAFT_0531 0.46 -0.8 526,371 - EX28DRAFT_0531 0.50 -0.7 526,371 - EX28DRAFT_0531 0.50 -2.2 526,383 - EX28DRAFT_0531 0.51 -2.2 526,489 + EX28DRAFT_0531 0.61 -0.8 526,793 - -2.4 526,929 + +0.2 526,930 - -0.4 526,935 - +0.5 526,975 + +0.1 526,976 - +0.1 526,976 - +0.1 527,013 + +0.5 527,013 + +0.3 527,014 - +0.7 527,014 - +0.7 527,014 - +0.2 527,014 - -0.2 527,014 - +0.2 527,015 + +0.0 527,015 + +0.4 527,015 + +0.1 527,015 + +0.3 527,015 + +0.1 527,015 + +0.0 527,015 + -2.3 527,016 - -0.1 527,016 - -0.2 527,016 - +0.7 527,020 + +0.1 527,020 + +0.0 527,021 - -0.4 527,030 + +0.1 527,033 + +0.5 527,034 - -1.3 527,034 - -0.2 527,068 - +0.6 527,127 - +0.3 527,135 + -0.1 527,190 + EX28DRAFT_0532 0.12 +0.8 527,213 + EX28DRAFT_0532 0.15 +1.3 527,284 + EX28DRAFT_0532 0.22 -0.8 527,285 - EX28DRAFT_0532 0.22 -0.1 527,285 - EX28DRAFT_0532 0.22 -2.7 527,365 - EX28DRAFT_0532 0.30 +0.4 527,412 - EX28DRAFT_0532 0.35 +0.4 527,424 + EX28DRAFT_0532 0.36 -1.3 527,476 - EX28DRAFT_0532 0.42 +0.5 527,518 + EX28DRAFT_0532 0.46 +0.8 527,518 + EX28DRAFT_0532 0.46 +0.4 527,615 + EX28DRAFT_0532 0.56 -0.1 527,735 + EX28DRAFT_0532 0.68 +0.0 527,735 + EX28DRAFT_0532 0.68 -0.7 527,830 + EX28DRAFT_0532 0.78 +0.1 527,874 - EX28DRAFT_0532 0.82 -0.4 527,874 - EX28DRAFT_0532 0.82 -0.2
Or see this region's nucleotide sequence