Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18920 and CA264_18925 are separated by 10 nucleotides CA264_18925 and CA264_18930 are separated by 315 nucleotides
CA264_18920: CA264_18920 - xenobiotic-transporting ATPase, at 4,392,894 to 4,394,627
_18920
CA264_18925: CA264_18925 - TetR family transcriptional regulator, at 4,394,638 to 4,395,324
_18925
CA264_18930: CA264_18930 - RNA helicase, at 4,395,640 to 4,396,905
_18930
Position (kb)
4394
4395
4396 Strain fitness (log2 ratio)
-1
0
1 at 4393.708 kb on + strand, within CA264_18920 at 4393.763 kb on + strand, within CA264_18920 at 4393.763 kb on + strand, within CA264_18920 at 4393.764 kb on - strand, within CA264_18920 at 4393.850 kb on + strand, within CA264_18920 at 4393.859 kb on + strand, within CA264_18920 at 4393.924 kb on + strand, within CA264_18920 at 4393.932 kb on + strand, within CA264_18920 at 4393.933 kb on - strand, within CA264_18920 at 4394.031 kb on - strand, within CA264_18920 at 4394.031 kb on - strand, within CA264_18920 at 4394.033 kb on - strand, within CA264_18920 at 4394.033 kb on - strand, within CA264_18920 at 4394.038 kb on + strand, within CA264_18920 at 4394.038 kb on + strand, within CA264_18920 at 4394.039 kb on - strand, within CA264_18920 at 4394.039 kb on - strand, within CA264_18920 at 4394.091 kb on + strand, within CA264_18920 at 4394.091 kb on + strand, within CA264_18920 at 4394.092 kb on - strand, within CA264_18920 at 4394.110 kb on - strand, within CA264_18920 at 4394.110 kb on - strand, within CA264_18920 at 4394.137 kb on + strand, within CA264_18920 at 4394.137 kb on + strand, within CA264_18920 at 4394.146 kb on + strand, within CA264_18920 at 4394.158 kb on - strand, within CA264_18920 at 4394.272 kb on + strand, within CA264_18920 at 4394.276 kb on - strand, within CA264_18920 at 4394.355 kb on + strand, within CA264_18920 at 4394.381 kb on + strand, within CA264_18920 at 4394.533 kb on + strand at 4394.533 kb on + strand at 4394.534 kb on - strand at 4394.535 kb on + strand at 4394.535 kb on + strand at 4394.535 kb on + strand at 4394.535 kb on + strand at 4394.536 kb on - strand at 4394.539 kb on + strand at 4394.539 kb on + strand at 4394.539 kb on + strand at 4394.539 kb on + strand at 4394.540 kb on - strand at 4394.540 kb on - strand at 4394.540 kb on - strand at 4394.545 kb on + strand at 4394.545 kb on + strand at 4394.546 kb on - strand at 4394.546 kb on - strand at 4394.602 kb on + strand at 4394.603 kb on - strand at 4394.603 kb on - strand at 4394.621 kb on + strand at 4394.621 kb on + strand at 4394.622 kb on - strand at 4394.622 kb on - strand at 4394.627 kb on + strand at 4394.628 kb on - strand at 4394.628 kb on - strand at 4394.788 kb on + strand, within CA264_18925 at 4394.788 kb on + strand, within CA264_18925 at 4394.788 kb on + strand, within CA264_18925 at 4394.865 kb on - strand, within CA264_18925 at 4394.876 kb on + strand, within CA264_18925 at 4394.910 kb on + strand, within CA264_18925 at 4394.910 kb on + strand, within CA264_18925 at 4394.910 kb on + strand, within CA264_18925 at 4394.911 kb on - strand, within CA264_18925 at 4394.915 kb on + strand, within CA264_18925 at 4394.916 kb on - strand, within CA264_18925 at 4394.917 kb on + strand, within CA264_18925 at 4394.918 kb on - strand, within CA264_18925 at 4394.918 kb on - strand, within CA264_18925 at 4395.056 kb on - strand, within CA264_18925 at 4395.108 kb on - strand, within CA264_18925 at 4395.218 kb on - strand, within CA264_18925 at 4395.278 kb on - strand at 4395.282 kb on - strand at 4395.320 kb on - strand at 4395.320 kb on - strand at 4395.320 kb on - strand at 4395.324 kb on + strand at 4395.324 kb on + strand at 4395.325 kb on - strand at 4395.325 kb on - strand at 4395.574 kb on + strand at 4395.574 kb on + strand at 4395.575 kb on - strand at 4395.575 kb on - strand at 4395.580 kb on + strand at 4395.580 kb on + strand at 4395.610 kb on + strand at 4395.610 kb on + strand at 4395.610 kb on + strand at 4395.611 kb on - strand at 4395.614 kb on + strand at 4395.624 kb on + strand at 4395.626 kb on + strand at 4395.627 kb on - strand at 4395.627 kb on - strand at 4395.630 kb on + strand at 4395.630 kb on + strand at 4395.675 kb on - strand at 4395.789 kb on + strand, within CA264_18930 at 4395.789 kb on + strand, within CA264_18930 at 4395.835 kb on - strand, within CA264_18930 at 4395.948 kb on + strand, within CA264_18930 at 4396.069 kb on - strand, within CA264_18930 at 4396.070 kb on + strand, within CA264_18930 at 4396.071 kb on - strand, within CA264_18930 at 4396.135 kb on - strand, within CA264_18930 at 4396.295 kb on + strand, within CA264_18930 at 4396.295 kb on + strand, within CA264_18930 at 4396.296 kb on - strand, within CA264_18930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 4,393,708 + CA264_18920 0.47 +0.6 4,393,763 + CA264_18920 0.50 +0.0 4,393,763 + CA264_18920 0.50 -0.9 4,393,764 - CA264_18920 0.50 -0.0 4,393,850 + CA264_18920 0.55 +1.2 4,393,859 + CA264_18920 0.56 +0.1 4,393,924 + CA264_18920 0.59 -0.8 4,393,932 + CA264_18920 0.60 +0.6 4,393,933 - CA264_18920 0.60 -0.4 4,394,031 - CA264_18920 0.66 -0.5 4,394,031 - CA264_18920 0.66 -0.4 4,394,033 - CA264_18920 0.66 +0.7 4,394,033 - CA264_18920 0.66 +0.3 4,394,038 + CA264_18920 0.66 +0.0 4,394,038 + CA264_18920 0.66 +0.5 4,394,039 - CA264_18920 0.66 +0.6 4,394,039 - CA264_18920 0.66 +0.5 4,394,091 + CA264_18920 0.69 +0.2 4,394,091 + CA264_18920 0.69 -0.1 4,394,092 - CA264_18920 0.69 +1.3 4,394,110 - CA264_18920 0.70 +0.6 4,394,110 - CA264_18920 0.70 +0.2 4,394,137 + CA264_18920 0.72 +0.1 4,394,137 + CA264_18920 0.72 +0.8 4,394,146 + CA264_18920 0.72 -0.6 4,394,158 - CA264_18920 0.73 +0.1 4,394,272 + CA264_18920 0.79 -0.2 4,394,276 - CA264_18920 0.80 -0.2 4,394,355 + CA264_18920 0.84 -0.4 4,394,381 + CA264_18920 0.86 -0.2 4,394,533 + +0.4 4,394,533 + -0.1 4,394,534 - -0.1 4,394,535 + -0.9 4,394,535 + -0.9 4,394,535 + +0.3 4,394,535 + +0.7 4,394,536 - +0.0 4,394,539 + +0.2 4,394,539 + -0.2 4,394,539 + -0.6 4,394,539 + -0.8 4,394,540 - +0.4 4,394,540 - -0.3 4,394,540 - +0.4 4,394,545 + +0.2 4,394,545 + +0.6 4,394,546 - -0.3 4,394,546 - -0.8 4,394,602 + -0.4 4,394,603 - -0.5 4,394,603 - +1.5 4,394,621 + +1.3 4,394,621 + -1.0 4,394,622 - +0.0 4,394,622 - +0.5 4,394,627 + +0.4 4,394,628 - -0.4 4,394,628 - -0.1 4,394,788 + CA264_18925 0.22 -0.0 4,394,788 + CA264_18925 0.22 -0.5 4,394,788 + CA264_18925 0.22 -0.3 4,394,865 - CA264_18925 0.33 +0.8 4,394,876 + CA264_18925 0.35 +0.1 4,394,910 + CA264_18925 0.40 +0.3 4,394,910 + CA264_18925 0.40 -0.9 4,394,910 + CA264_18925 0.40 -0.3 4,394,911 - CA264_18925 0.40 -0.2 4,394,915 + CA264_18925 0.40 -0.8 4,394,916 - CA264_18925 0.40 -0.6 4,394,917 + CA264_18925 0.41 +0.1 4,394,918 - CA264_18925 0.41 +0.1 4,394,918 - CA264_18925 0.41 -0.8 4,395,056 - CA264_18925 0.61 -0.7 4,395,108 - CA264_18925 0.68 +0.5 4,395,218 - CA264_18925 0.84 -0.5 4,395,278 - +0.2 4,395,282 - -0.5 4,395,320 - -0.3 4,395,320 - -0.8 4,395,320 - -0.4 4,395,324 + -0.2 4,395,324 + +0.5 4,395,325 - +0.5 4,395,325 - -0.8 4,395,574 + -0.2 4,395,574 + -1.0 4,395,575 - +0.0 4,395,575 - -0.6 4,395,580 + +0.1 4,395,580 + -0.1 4,395,610 + -0.1 4,395,610 + -0.1 4,395,610 + -0.3 4,395,611 - -0.1 4,395,614 + -0.3 4,395,624 + -0.9 4,395,626 + -0.1 4,395,627 - +0.1 4,395,627 - -0.0 4,395,630 + +0.1 4,395,630 + +0.2 4,395,675 - -0.3 4,395,789 + CA264_18930 0.12 -0.4 4,395,789 + CA264_18930 0.12 -0.2 4,395,835 - CA264_18930 0.15 -1.4 4,395,948 + CA264_18930 0.24 -0.5 4,396,069 - CA264_18930 0.34 -1.7 4,396,070 + CA264_18930 0.34 +0.8 4,396,071 - CA264_18930 0.34 +0.1 4,396,135 - CA264_18930 0.39 -0.7 4,396,295 + CA264_18930 0.52 -0.9 4,396,295 + CA264_18930 0.52 -0.1 4,396,296 - CA264_18930 0.52 +0.9
Or see this region's nucleotide sequence