Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13745 and CA264_13750 are separated by 159 nucleotides CA264_13750 and CA264_13755 are separated by 401 nucleotides
CA264_13745: CA264_13745 - adenine deaminase, at 3,211,169 to 3,212,803
_13745
CA264_13750: CA264_13750 - response regulator, at 3,212,963 to 3,213,406
_13750
CA264_13755: CA264_13755 - cystathionine beta-synthase, at 3,213,808 to 3,214,791
_13755
Position (kb)
3212
3213
3214 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.031 kb on - strand, within CA264_13745 at 3212.031 kb on - strand, within CA264_13745 at 3212.078 kb on - strand, within CA264_13745 at 3212.079 kb on + strand, within CA264_13745 at 3212.079 kb on + strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.084 kb on - strand, within CA264_13745 at 3212.084 kb on - strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.086 kb on - strand, within CA264_13745 at 3212.198 kb on - strand, within CA264_13745 at 3212.257 kb on - strand, within CA264_13745 at 3212.476 kb on + strand, within CA264_13745 at 3212.476 kb on + strand, within CA264_13745 at 3212.477 kb on - strand, within CA264_13745 at 3212.479 kb on + strand, within CA264_13745 at 3212.480 kb on - strand, within CA264_13745 at 3212.551 kb on - strand, within CA264_13745 at 3212.624 kb on + strand, within CA264_13745 at 3212.901 kb on - strand at 3212.955 kb on + strand at 3212.958 kb on - strand at 3213.046 kb on + strand, within CA264_13750 at 3213.047 kb on - strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.103 kb on + strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.153 kb on + strand, within CA264_13750 at 3213.221 kb on - strand, within CA264_13750 at 3213.233 kb on - strand, within CA264_13750 at 3213.260 kb on - strand, within CA264_13750 at 3213.265 kb on + strand, within CA264_13750 at 3213.267 kb on + strand, within CA264_13750 at 3213.268 kb on - strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.289 kb on + strand, within CA264_13750 at 3213.364 kb on + strand at 3213.364 kb on + strand at 3213.365 kb on - strand at 3213.407 kb on - strand at 3213.424 kb on + strand at 3213.425 kb on - strand at 3213.446 kb on - strand at 3213.598 kb on - strand at 3213.616 kb on - strand at 3213.646 kb on - strand at 3213.695 kb on + strand at 3213.695 kb on + strand at 3213.696 kb on - strand at 3213.697 kb on + strand at 3213.698 kb on - strand at 3213.705 kb on + strand at 3213.705 kb on + strand at 3213.706 kb on - strand at 3213.706 kb on - strand at 3213.732 kb on - strand at 3213.741 kb on + strand at 3213.741 kb on + strand at 3213.797 kb on + strand at 3214.169 kb on + strand, within CA264_13755
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 3,212,030 + CA264_13745 0.53 -0.3 3,212,030 + CA264_13745 0.53 -0.2 3,212,030 + CA264_13745 0.53 -2.0 3,212,030 + CA264_13745 0.53 -1.3 3,212,031 - CA264_13745 0.53 +0.3 3,212,031 - CA264_13745 0.53 -0.3 3,212,078 - CA264_13745 0.56 -0.7 3,212,079 + CA264_13745 0.56 +0.7 3,212,079 + CA264_13745 0.56 +0.8 3,212,080 - CA264_13745 0.56 +0.1 3,212,080 - CA264_13745 0.56 +1.2 3,212,080 - CA264_13745 0.56 +0.1 3,212,084 - CA264_13745 0.56 -0.6 3,212,084 - CA264_13745 0.56 +0.0 3,212,085 + CA264_13745 0.56 -0.5 3,212,085 + CA264_13745 0.56 +0.6 3,212,085 + CA264_13745 0.56 +0.6 3,212,086 - CA264_13745 0.56 +1.8 3,212,198 - CA264_13745 0.63 -0.7 3,212,257 - CA264_13745 0.67 +0.4 3,212,476 + CA264_13745 0.80 -0.5 3,212,476 + CA264_13745 0.80 -0.5 3,212,477 - CA264_13745 0.80 +0.4 3,212,479 + CA264_13745 0.80 +0.0 3,212,480 - CA264_13745 0.80 +0.9 3,212,551 - CA264_13745 0.85 -0.4 3,212,624 + CA264_13745 0.89 -0.9 3,212,901 - -0.2 3,212,955 + +0.2 3,212,958 - -0.6 3,213,046 + CA264_13750 0.19 +0.5 3,213,047 - CA264_13750 0.19 +0.0 3,213,060 + CA264_13750 0.22 +0.3 3,213,060 + CA264_13750 0.22 -0.2 3,213,103 + CA264_13750 0.32 +0.3 3,213,104 - CA264_13750 0.32 -0.2 3,213,104 - CA264_13750 0.32 -0.2 3,213,122 - CA264_13750 0.36 +0.7 3,213,122 - CA264_13750 0.36 -1.0 3,213,153 + CA264_13750 0.43 -0.1 3,213,221 - CA264_13750 0.58 +0.2 3,213,233 - CA264_13750 0.61 +1.3 3,213,260 - CA264_13750 0.67 -0.8 3,213,265 + CA264_13750 0.68 -0.4 3,213,267 + CA264_13750 0.68 -0.4 3,213,268 - CA264_13750 0.69 -0.7 3,213,269 + CA264_13750 0.69 +0.9 3,213,269 + CA264_13750 0.69 -0.3 3,213,269 + CA264_13750 0.69 -0.3 3,213,270 - CA264_13750 0.69 -0.6 3,213,270 - CA264_13750 0.69 -0.1 3,213,289 + CA264_13750 0.73 -0.5 3,213,364 + -0.1 3,213,364 + -0.5 3,213,365 - -0.0 3,213,407 - +0.9 3,213,424 + -0.0 3,213,425 - -0.3 3,213,446 - +0.4 3,213,598 - +1.9 3,213,616 - +0.0 3,213,646 - -0.4 3,213,695 + -0.9 3,213,695 + +0.2 3,213,696 - +0.2 3,213,697 + +0.5 3,213,698 - -0.4 3,213,705 + +0.6 3,213,705 + +0.8 3,213,706 - -0.2 3,213,706 - +0.3 3,213,732 - +0.3 3,213,741 + -0.9 3,213,741 + -0.2 3,213,797 + +0.1 3,214,169 + CA264_13755 0.37 -3.0
Or see this region's nucleotide sequence