Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11275 and CA264_11280 overlap by 17 nucleotides CA264_11280 and CA264_11285 overlap by 14 nucleotides CA264_11285 and CA264_11290 are separated by 131 nucleotides
CA264_11275: CA264_11275 - hypothetical protein, at 2,611,204 to 2,611,644
_11275
CA264_11280: CA264_11280 - SCO family protein, at 2,611,628 to 2,612,311
_11280
CA264_11285: CA264_11285 - cytochrome c class I, at 2,612,298 to 2,612,705
_11285
CA264_11290: CA264_11290 - NADH pyrophosphatase, at 2,612,837 to 2,613,760
_11290
Position (kb)
2612
2613 Strain fitness (log2 ratio)
-2
-1
0
1 at 2611.350 kb on + strand, within CA264_11275 at 2611.350 kb on + strand, within CA264_11275 at 2611.351 kb on - strand, within CA264_11275 at 2611.351 kb on - strand, within CA264_11275 at 2611.541 kb on - strand, within CA264_11275 at 2611.575 kb on - strand, within CA264_11275 at 2611.620 kb on - strand at 2611.665 kb on + strand at 2611.704 kb on - strand, within CA264_11280 at 2611.742 kb on - strand, within CA264_11280 at 2611.742 kb on - strand, within CA264_11280 at 2611.883 kb on + strand, within CA264_11280 at 2611.965 kb on - strand, within CA264_11280 at 2612.318 kb on - strand at 2612.726 kb on + strand at 2612.727 kb on - strand at 2612.727 kb on - strand at 2612.839 kb on - strand at 2612.865 kb on + strand at 2612.865 kb on + strand at 2612.866 kb on - strand at 2613.003 kb on + strand, within CA264_11290 at 2613.004 kb on - strand, within CA264_11290 at 2613.008 kb on - strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.091 kb on - strand, within CA264_11290 at 2613.091 kb on - strand, within CA264_11290 at 2613.096 kb on - strand, within CA264_11290 at 2613.097 kb on + strand, within CA264_11290 at 2613.192 kb on + strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.250 kb on + strand, within CA264_11290 at 2613.254 kb on + strand, within CA264_11290 at 2613.310 kb on + strand, within CA264_11290 at 2613.342 kb on + strand, within CA264_11290 at 2613.343 kb on - strand, within CA264_11290 at 2613.347 kb on - strand, within CA264_11290 at 2613.347 kb on - strand, within CA264_11290 at 2613.552 kb on + strand, within CA264_11290 at 2613.641 kb on + strand, within CA264_11290 at 2613.641 kb on + strand, within CA264_11290 at 2613.642 kb on - strand, within CA264_11290 at 2613.642 kb on - strand, within CA264_11290 at 2613.663 kb on - strand, within CA264_11290
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,611,350 + CA264_11275 0.33 -0.1 2,611,350 + CA264_11275 0.33 +1.0 2,611,351 - CA264_11275 0.33 -1.6 2,611,351 - CA264_11275 0.33 +0.1 2,611,541 - CA264_11275 0.76 -0.5 2,611,575 - CA264_11275 0.84 -1.5 2,611,620 - -0.3 2,611,665 + -1.5 2,611,704 - CA264_11280 0.11 +0.4 2,611,742 - CA264_11280 0.17 -2.4 2,611,742 - CA264_11280 0.17 -2.6 2,611,883 + CA264_11280 0.37 -1.1 2,611,965 - CA264_11280 0.49 -2.0 2,612,318 - -0.3 2,612,726 + -0.3 2,612,727 - -1.3 2,612,727 - +1.2 2,612,839 - +1.4 2,612,865 + -0.2 2,612,865 + +0.0 2,612,866 - +0.4 2,613,003 + CA264_11290 0.18 -0.7 2,613,004 - CA264_11290 0.18 -0.3 2,613,008 - CA264_11290 0.19 -1.2 2,613,090 + CA264_11290 0.27 -0.5 2,613,090 + CA264_11290 0.27 -0.8 2,613,090 + CA264_11290 0.27 -0.4 2,613,090 + CA264_11290 0.27 -0.0 2,613,091 - CA264_11290 0.27 +0.6 2,613,091 - CA264_11290 0.27 +0.2 2,613,096 - CA264_11290 0.28 -0.3 2,613,097 + CA264_11290 0.28 -1.3 2,613,192 + CA264_11290 0.38 -0.4 2,613,193 - CA264_11290 0.39 +0.3 2,613,193 - CA264_11290 0.39 +0.3 2,613,193 - CA264_11290 0.39 -0.2 2,613,193 - CA264_11290 0.39 +0.3 2,613,193 - CA264_11290 0.39 +0.0 2,613,193 - CA264_11290 0.39 +0.1 2,613,250 + CA264_11290 0.45 -0.2 2,613,254 + CA264_11290 0.45 +0.6 2,613,310 + CA264_11290 0.51 +0.8 2,613,342 + CA264_11290 0.55 +0.1 2,613,343 - CA264_11290 0.55 +0.2 2,613,347 - CA264_11290 0.55 +0.2 2,613,347 - CA264_11290 0.55 +0.2 2,613,552 + CA264_11290 0.77 -0.3 2,613,641 + CA264_11290 0.87 -0.6 2,613,641 + CA264_11290 0.87 +0.1 2,613,642 - CA264_11290 0.87 -0.2 2,613,642 - CA264_11290 0.87 -1.0 2,613,663 - CA264_11290 0.89 -0.5
Or see this region's nucleotide sequence