Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07460 and CA264_07465 are separated by 44 nucleotides CA264_07465 and CA264_07470 are separated by 456 nucleotides CA264_07470 and CA264_07475 are separated by 56 nucleotides
CA264_07460: CA264_07460 - hypothetical protein, at 1,725,854 to 1,728,571
_07460
CA264_07465: CA264_07465 - hypothetical protein, at 1,728,616 to 1,728,801
_07465
CA264_07470: CA264_07470 - glucose-6-phosphate isomerase, at 1,729,258 to 1,730,904
_07470
CA264_07475: CA264_07475 - hypothetical protein, at 1,730,961 to 1,732,550
_07475
Position (kb)
1729
1730
1731 Strain fitness (log2 ratio)
-2
-1
0
1 at 1728.315 kb on + strand at 1728.315 kb on + strand at 1728.315 kb on + strand at 1728.315 kb on + strand at 1728.316 kb on - strand at 1728.339 kb on + strand at 1728.348 kb on - strand at 1728.375 kb on - strand at 1728.377 kb on - strand at 1728.377 kb on - strand at 1728.547 kb on - strand at 1728.564 kb on - strand at 1728.571 kb on + strand at 1728.571 kb on + strand at 1728.572 kb on - strand at 1728.572 kb on - strand at 1728.572 kb on - strand at 1728.575 kb on + strand at 1728.583 kb on + strand at 1728.583 kb on + strand at 1728.583 kb on + strand at 1728.583 kb on + strand at 1728.584 kb on - strand at 1728.584 kb on - strand at 1728.599 kb on + strand at 1728.697 kb on + strand, within CA264_07465 at 1728.697 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.702 kb on - strand, within CA264_07465 at 1728.804 kb on + strand at 1728.804 kb on + strand at 1728.805 kb on - strand at 1728.808 kb on + strand at 1728.808 kb on + strand at 1728.808 kb on + strand at 1728.808 kb on + strand at 1728.809 kb on - strand at 1728.819 kb on + strand at 1728.820 kb on - strand at 1728.860 kb on - strand at 1728.869 kb on - strand at 1728.869 kb on - strand at 1728.869 kb on - strand at 1728.869 kb on - strand at 1728.872 kb on - strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.874 kb on - strand at 1728.895 kb on + strand at 1729.003 kb on + strand at 1729.008 kb on + strand at 1729.010 kb on + strand at 1729.011 kb on - strand at 1729.027 kb on - strand at 1729.048 kb on + strand at 1729.048 kb on + strand at 1729.067 kb on - strand at 1729.082 kb on + strand at 1729.103 kb on + strand at 1729.113 kb on + strand at 1729.113 kb on + strand at 1729.119 kb on + strand at 1729.172 kb on - strand at 1729.173 kb on + strand at 1729.173 kb on + strand at 1729.174 kb on - strand at 1729.177 kb on + strand at 1729.178 kb on - strand at 1729.178 kb on - strand at 1729.178 kb on - strand at 1729.178 kb on - strand at 1729.180 kb on - strand at 1729.217 kb on + strand at 1729.218 kb on - strand at 1729.254 kb on + strand at 1729.254 kb on + strand at 1729.255 kb on - strand at 1729.255 kb on - strand at 1729.257 kb on + strand at 1729.795 kb on + strand, within CA264_07470 at 1729.869 kb on + strand, within CA264_07470 at 1729.993 kb on - strand, within CA264_07470 at 1730.281 kb on + strand, within CA264_07470 at 1730.676 kb on + strand, within CA264_07470 at 1730.820 kb on - strand at 1730.903 kb on - strand at 1730.926 kb on - strand at 1730.926 kb on - strand at 1730.934 kb on - strand at 1730.947 kb on + strand at 1730.955 kb on + strand at 1730.955 kb on + strand at 1730.956 kb on - strand at 1730.956 kb on - strand at 1730.960 kb on + strand at 1730.960 kb on + strand at 1730.960 kb on + strand at 1730.961 kb on - strand at 1731.001 kb on + strand at 1731.061 kb on + strand at 1731.118 kb on - strand at 1731.217 kb on - strand, within CA264_07475 at 1731.227 kb on - strand, within CA264_07475 at 1731.233 kb on - strand, within CA264_07475 at 1731.298 kb on - strand, within CA264_07475 at 1731.317 kb on + strand, within CA264_07475 at 1731.415 kb on + strand, within CA264_07475 at 1731.448 kb on + strand, within CA264_07475 at 1731.448 kb on + strand, within CA264_07475 at 1731.448 kb on + strand, within CA264_07475 at 1731.449 kb on - strand, within CA264_07475 at 1731.474 kb on + strand, within CA264_07475 at 1731.475 kb on - strand, within CA264_07475 at 1731.520 kb on + strand, within CA264_07475 at 1731.573 kb on - strand, within CA264_07475 at 1731.648 kb on + strand, within CA264_07475 at 1731.655 kb on + strand, within CA264_07475 at 1731.761 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.765 kb on + strand, within CA264_07475 at 1731.766 kb on - strand, within CA264_07475 at 1731.768 kb on + strand, within CA264_07475 at 1731.768 kb on + strand, within CA264_07475 at 1731.769 kb on - strand, within CA264_07475 at 1731.904 kb on - strand, within CA264_07475
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 1,728,315 + +0.6 1,728,315 + +0.7 1,728,315 + -0.4 1,728,315 + +0.5 1,728,316 - -0.3 1,728,339 + -0.3 1,728,348 - -1.7 1,728,375 - +0.0 1,728,377 - -0.8 1,728,377 - -0.9 1,728,547 - -0.2 1,728,564 - -1.4 1,728,571 + -0.5 1,728,571 + -0.4 1,728,572 - -0.9 1,728,572 - +0.4 1,728,572 - -0.2 1,728,575 + -0.2 1,728,583 + +0.1 1,728,583 + -0.9 1,728,583 + +0.2 1,728,583 + -0.5 1,728,584 - +0.5 1,728,584 - -0.3 1,728,599 + +0.8 1,728,697 + CA264_07465 0.44 -0.6 1,728,697 + CA264_07465 0.44 -0.6 1,728,699 + CA264_07465 0.45 +0.6 1,728,699 + CA264_07465 0.45 +0.1 1,728,699 + CA264_07465 0.45 +0.2 1,728,699 + CA264_07465 0.45 +1.1 1,728,700 - CA264_07465 0.45 +0.0 1,728,700 - CA264_07465 0.45 -0.3 1,728,700 - CA264_07465 0.45 +0.4 1,728,700 - CA264_07465 0.45 -0.2 1,728,702 - CA264_07465 0.46 -0.2 1,728,804 + -0.6 1,728,804 + -0.0 1,728,805 - -0.5 1,728,808 + +0.0 1,728,808 + -0.9 1,728,808 + -0.4 1,728,808 + -0.4 1,728,809 - +0.2 1,728,819 + -0.8 1,728,820 - +0.2 1,728,860 - -0.6 1,728,869 - -0.9 1,728,869 - -0.2 1,728,869 - -0.4 1,728,869 - -1.2 1,728,872 - -1.8 1,728,873 + -0.6 1,728,873 + +0.3 1,728,873 + +0.3 1,728,873 + -0.5 1,728,873 + +0.1 1,728,874 - -0.8 1,728,895 + +0.0 1,729,003 + -0.3 1,729,008 + -0.3 1,729,010 + -0.7 1,729,011 - -0.3 1,729,027 - -0.9 1,729,048 + -0.3 1,729,048 + +0.1 1,729,067 - +0.0 1,729,082 + -1.5 1,729,103 + +1.3 1,729,113 + -1.2 1,729,113 + -0.2 1,729,119 + +0.7 1,729,172 - -1.0 1,729,173 + -1.1 1,729,173 + +0.1 1,729,174 - +0.8 1,729,177 + -0.3 1,729,178 - +0.6 1,729,178 - -0.4 1,729,178 - +0.8 1,729,178 - +0.1 1,729,180 - +0.2 1,729,217 + -0.4 1,729,218 - +0.8 1,729,254 + -0.5 1,729,254 + -0.2 1,729,255 - -0.8 1,729,255 - -0.0 1,729,257 + -0.3 1,729,795 + CA264_07470 0.33 -1.6 1,729,869 + CA264_07470 0.37 -0.0 1,729,993 - CA264_07470 0.45 +0.3 1,730,281 + CA264_07470 0.62 -0.7 1,730,676 + CA264_07470 0.86 +0.7 1,730,820 - -0.7 1,730,903 - -0.5 1,730,926 - -1.1 1,730,926 - -0.7 1,730,934 - +0.5 1,730,947 + -0.1 1,730,955 + -0.3 1,730,955 + +0.2 1,730,956 - -1.8 1,730,956 - +0.3 1,730,960 + -0.0 1,730,960 + -0.3 1,730,960 + -0.1 1,730,961 - -0.6 1,731,001 + -0.7 1,731,061 + +0.0 1,731,118 - -0.4 1,731,217 - CA264_07475 0.16 -0.8 1,731,227 - CA264_07475 0.17 -0.4 1,731,233 - CA264_07475 0.17 -0.4 1,731,298 - CA264_07475 0.21 +1.3 1,731,317 + CA264_07475 0.22 -0.3 1,731,415 + CA264_07475 0.29 -0.1 1,731,448 + CA264_07475 0.31 -1.0 1,731,448 + CA264_07475 0.31 -0.4 1,731,448 + CA264_07475 0.31 -0.8 1,731,449 - CA264_07475 0.31 -0.4 1,731,474 + CA264_07475 0.32 +0.1 1,731,475 - CA264_07475 0.32 -0.4 1,731,520 + CA264_07475 0.35 +0.7 1,731,573 - CA264_07475 0.38 +0.0 1,731,648 + CA264_07475 0.43 -0.3 1,731,655 + CA264_07475 0.44 +0.3 1,731,761 + CA264_07475 0.50 -1.2 1,731,765 + CA264_07475 0.51 +0.5 1,731,765 + CA264_07475 0.51 +0.7 1,731,765 + CA264_07475 0.51 +0.2 1,731,766 - CA264_07475 0.51 -1.0 1,731,768 + CA264_07475 0.51 -1.2 1,731,768 + CA264_07475 0.51 -0.9 1,731,769 - CA264_07475 0.51 -0.2 1,731,904 - CA264_07475 0.59 -0.7
Or see this region's nucleotide sequence