Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00045 and CA264_00050 are separated by 221 nucleotides CA264_00050 and CA264_00055 are separated by 69 nucleotides
CA264_00045: CA264_00045 - endopeptidase La, at 11,239 to 13,728
_00045
CA264_00050: CA264_00050 - hypothetical protein, at 13,950 to 14,993
_00050
CA264_00055: CA264_00055 - ATP-dependent protease ATP-binding subunit HslU, at 15,063 to 16,457
_00055
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1
2 at 12.953 kb on - strand, within CA264_00045 at 12.953 kb on - strand, within CA264_00045 at 13.139 kb on + strand, within CA264_00045 at 13.193 kb on + strand, within CA264_00045 at 13.194 kb on - strand, within CA264_00045 at 13.611 kb on + strand at 13.625 kb on + strand at 13.759 kb on + strand at 13.760 kb on - strand at 13.849 kb on - strand at 13.849 kb on - strand at 13.857 kb on + strand at 13.857 kb on + strand at 13.919 kb on - strand at 13.930 kb on + strand at 13.930 kb on + strand at 13.936 kb on + strand at 13.936 kb on + strand at 13.967 kb on + strand at 13.970 kb on - strand at 13.970 kb on - strand at 13.973 kb on + strand at 13.973 kb on + strand at 13.997 kb on + strand at 14.119 kb on + strand, within CA264_00050 at 14.120 kb on - strand, within CA264_00050 at 14.176 kb on - strand, within CA264_00050 at 14.176 kb on - strand, within CA264_00050 at 14.176 kb on - strand, within CA264_00050 at 14.185 kb on - strand, within CA264_00050 at 14.258 kb on + strand, within CA264_00050 at 14.258 kb on + strand, within CA264_00050 at 14.260 kb on + strand, within CA264_00050 at 14.261 kb on - strand, within CA264_00050 at 14.265 kb on + strand, within CA264_00050 at 14.266 kb on - strand, within CA264_00050 at 14.318 kb on + strand, within CA264_00050 at 14.435 kb on - strand, within CA264_00050 at 14.441 kb on - strand, within CA264_00050 at 14.466 kb on - strand, within CA264_00050 at 14.504 kb on + strand, within CA264_00050 at 14.517 kb on + strand, within CA264_00050 at 14.525 kb on - strand, within CA264_00050 at 14.533 kb on - strand, within CA264_00050 at 14.730 kb on - strand, within CA264_00050 at 14.799 kb on + strand, within CA264_00050 at 14.940 kb on + strand at 14.987 kb on + strand at 14.988 kb on - strand at 14.991 kb on + strand at 14.992 kb on - strand at 15.017 kb on + strand at 15.046 kb on - strand at 15.046 kb on - strand at 15.067 kb on + strand at 15.067 kb on + strand at 15.067 kb on + strand at 15.068 kb on - strand at 15.071 kb on + strand at 15.075 kb on - strand at 15.120 kb on + strand at 15.260 kb on + strand, within CA264_00055 at 15.308 kb on + strand, within CA264_00055 at 15.308 kb on + strand, within CA264_00055 at 15.333 kb on - strand, within CA264_00055 at 15.340 kb on + strand, within CA264_00055 at 15.340 kb on + strand, within CA264_00055 at 15.761 kb on - strand, within CA264_00055 at 15.761 kb on - strand, within CA264_00055 at 15.761 kb on - strand, within CA264_00055 at 15.807 kb on - strand, within CA264_00055 at 15.807 kb on - strand, within CA264_00055
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 12,953 - CA264_00045 0.69 -0.0 12,953 - CA264_00045 0.69 -0.3 13,139 + CA264_00045 0.76 -0.5 13,193 + CA264_00045 0.78 -0.1 13,194 - CA264_00045 0.79 -0.0 13,611 + +0.3 13,625 + +1.8 13,759 + -0.2 13,760 - -0.4 13,849 - +0.7 13,849 - +0.6 13,857 + +0.5 13,857 + +0.1 13,919 - -0.4 13,930 + -1.7 13,930 + +0.3 13,936 + -0.2 13,936 + +0.1 13,967 + -0.7 13,970 - +0.2 13,970 - +0.9 13,973 + -0.3 13,973 + +0.6 13,997 + +0.1 14,119 + CA264_00050 0.16 -1.2 14,120 - CA264_00050 0.16 +0.8 14,176 - CA264_00050 0.22 -0.4 14,176 - CA264_00050 0.22 -0.8 14,176 - CA264_00050 0.22 +0.1 14,185 - CA264_00050 0.23 -1.2 14,258 + CA264_00050 0.30 -0.3 14,258 + CA264_00050 0.30 -1.3 14,260 + CA264_00050 0.30 +0.7 14,261 - CA264_00050 0.30 +0.4 14,265 + CA264_00050 0.30 -1.0 14,266 - CA264_00050 0.30 -0.7 14,318 + CA264_00050 0.35 -0.3 14,435 - CA264_00050 0.46 -0.3 14,441 - CA264_00050 0.47 -0.1 14,466 - CA264_00050 0.49 +1.4 14,504 + CA264_00050 0.53 +0.6 14,517 + CA264_00050 0.54 -0.4 14,525 - CA264_00050 0.55 +0.4 14,533 - CA264_00050 0.56 -0.0 14,730 - CA264_00050 0.75 -1.0 14,799 + CA264_00050 0.81 +1.8 14,940 + +1.5 14,987 + +0.3 14,988 - +0.1 14,991 + +0.4 14,992 - +0.7 15,017 + -1.0 15,046 - -0.3 15,046 - +0.4 15,067 + -0.6 15,067 + -0.1 15,067 + -0.7 15,068 - -0.5 15,071 + -0.8 15,075 - -0.3 15,120 + -1.8 15,260 + CA264_00055 0.14 +0.4 15,308 + CA264_00055 0.18 -0.4 15,308 + CA264_00055 0.18 +0.2 15,333 - CA264_00055 0.19 -0.6 15,340 + CA264_00055 0.20 -0.6 15,340 + CA264_00055 0.20 -1.2 15,761 - CA264_00055 0.50 -0.2 15,761 - CA264_00055 0.50 +0.4 15,761 - CA264_00055 0.50 -0.1 15,807 - CA264_00055 0.53 +0.1 15,807 - CA264_00055 0.53 -0.3
Or see this region's nucleotide sequence