Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_25250 and IAI46_25255 are separated by 101 nucleotides IAI46_25255 and IAI46_25260 are separated by 2 nucleotides IAI46_25260 and IAI46_25265 overlap by 37 nucleotides IAI46_25265 and IAI46_25270 are separated by 18 nucleotides
IAI46_25250: IAI46_25250 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 5,391,018 to 5,392,382
_25250
IAI46_25255: IAI46_25255 - membrane protein insertase YidC, at 5,392,484 to 5,394,121
_25255
IAI46_25260: IAI46_25260 - membrane protein insertion efficiency factor YidD, at 5,394,124 to 5,394,381
_25260
IAI46_25265: IAI46_25265 - ribonuclease P protein component, at 5,394,345 to 5,394,704
_25265
IAI46_25270: IAI46_25270 - 50S ribosomal protein L34, at 5,394,723 to 5,394,863
_25270
Position (kb)
5392
5393
5394
5395 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5391.608 kb on - strand, within IAI46_25250 at 5391.609 kb on - strand, within IAI46_25250 at 5391.774 kb on + strand, within IAI46_25250 at 5391.822 kb on - strand, within IAI46_25250 at 5391.873 kb on + strand, within IAI46_25250 at 5391.873 kb on + strand, within IAI46_25250 at 5391.877 kb on + strand, within IAI46_25250 at 5391.893 kb on + strand, within IAI46_25250 at 5391.894 kb on - strand, within IAI46_25250 at 5391.894 kb on - strand, within IAI46_25250 at 5392.093 kb on - strand, within IAI46_25250 at 5392.240 kb on + strand, within IAI46_25250 at 5392.288 kb on - strand at 5392.360 kb on - strand at 5392.382 kb on + strand at 5392.383 kb on - strand at 5392.407 kb on - strand at 5392.424 kb on + strand at 5392.424 kb on + strand at 5392.425 kb on - strand at 5392.425 kb on - strand at 5392.438 kb on + strand at 5392.438 kb on + strand at 5392.474 kb on + strand at 5392.479 kb on + strand at 5392.480 kb on - strand at 5392.480 kb on - strand at 5392.485 kb on + strand at 5392.485 kb on + strand at 5392.485 kb on + strand at 5392.486 kb on - strand at 5392.486 kb on - strand at 5394.229 kb on + strand, within IAI46_25260 at 5394.230 kb on - strand, within IAI46_25260 at 5394.230 kb on - strand, within IAI46_25260 at 5394.230 kb on - strand, within IAI46_25260 at 5394.248 kb on - strand, within IAI46_25260 at 5394.248 kb on - strand, within IAI46_25260 at 5395.097 kb on + strand at 5395.109 kb on + strand at 5395.110 kb on - strand at 5395.117 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 5,391,608 - IAI46_25250 0.43 +0.3 5,391,609 - IAI46_25250 0.43 -0.5 5,391,774 + IAI46_25250 0.55 +1.3 5,391,822 - IAI46_25250 0.59 +0.1 5,391,873 + IAI46_25250 0.63 +0.3 5,391,873 + IAI46_25250 0.63 +0.7 5,391,877 + IAI46_25250 0.63 +0.7 5,391,893 + IAI46_25250 0.64 +0.1 5,391,894 - IAI46_25250 0.64 -0.1 5,391,894 - IAI46_25250 0.64 +0.7 5,392,093 - IAI46_25250 0.79 -1.1 5,392,240 + IAI46_25250 0.90 -1.4 5,392,288 - -1.2 5,392,360 - +0.1 5,392,382 + +0.8 5,392,383 - +0.7 5,392,407 - -0.0 5,392,424 + +0.9 5,392,424 + +0.1 5,392,425 - +0.3 5,392,425 - +0.9 5,392,438 + -0.3 5,392,438 + -3.0 5,392,474 + +0.3 5,392,479 + +0.1 5,392,480 - +0.3 5,392,480 - -0.0 5,392,485 + -1.3 5,392,485 + -0.8 5,392,485 + +0.0 5,392,486 - +0.3 5,392,486 - +0.1 5,394,229 + IAI46_25260 0.41 -0.5 5,394,230 - IAI46_25260 0.41 +0.1 5,394,230 - IAI46_25260 0.41 -0.3 5,394,230 - IAI46_25260 0.41 +0.5 5,394,248 - IAI46_25260 0.48 -0.6 5,394,248 - IAI46_25260 0.48 -1.1 5,395,097 + +0.1 5,395,109 + -1.2 5,395,110 - +0.3 5,395,117 + +0.8
Or see this region's nucleotide sequence