Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24250 and IAI46_24255 overlap by 11 nucleotides IAI46_24255 and IAI46_24260 are separated by 465 nucleotides
IAI46_24250: IAI46_24250 - response regulator, at 5,169,759 to 5,171,543
_24250
IAI46_24255: IAI46_24255 - response regulator, at 5,171,533 to 5,172,384
_24255
IAI46_24260: IAI46_24260 - autotransporter outer membrane beta-barrel domain-containing protein, at 5,172,850 to 5,175,951
_24260
Position (kb)
5171
5172
5173 Strain fitness (log2 ratio)
-1
0
1
2 at 5170.612 kb on - strand, within IAI46_24250 at 5170.631 kb on + strand, within IAI46_24250 at 5170.647 kb on - strand, within IAI46_24250 at 5170.762 kb on + strand, within IAI46_24250 at 5170.762 kb on + strand, within IAI46_24250 at 5170.763 kb on - strand, within IAI46_24250 at 5170.781 kb on + strand, within IAI46_24250 at 5170.782 kb on - strand, within IAI46_24250 at 5170.824 kb on + strand, within IAI46_24250 at 5170.827 kb on - strand, within IAI46_24250 at 5170.853 kb on + strand, within IAI46_24250 at 5170.853 kb on + strand, within IAI46_24250 at 5170.853 kb on + strand, within IAI46_24250 at 5170.853 kb on + strand, within IAI46_24250 at 5170.853 kb on + strand, within IAI46_24250 at 5170.854 kb on - strand, within IAI46_24250 at 5170.854 kb on - strand, within IAI46_24250 at 5170.854 kb on - strand, within IAI46_24250 at 5170.854 kb on - strand, within IAI46_24250 at 5170.854 kb on - strand, within IAI46_24250 at 5170.892 kb on + strand, within IAI46_24250 at 5170.893 kb on - strand, within IAI46_24250 at 5170.979 kb on + strand, within IAI46_24250 at 5171.061 kb on + strand, within IAI46_24250 at 5171.062 kb on - strand, within IAI46_24250 at 5171.090 kb on + strand, within IAI46_24250 at 5171.108 kb on - strand, within IAI46_24250 at 5171.180 kb on + strand, within IAI46_24250 at 5171.180 kb on + strand, within IAI46_24250 at 5171.180 kb on + strand, within IAI46_24250 at 5171.180 kb on + strand, within IAI46_24250 at 5171.180 kb on + strand, within IAI46_24250 at 5171.181 kb on - strand, within IAI46_24250 at 5171.181 kb on - strand, within IAI46_24250 at 5171.181 kb on - strand, within IAI46_24250 at 5171.181 kb on - strand, within IAI46_24250 at 5171.181 kb on - strand, within IAI46_24250 at 5171.201 kb on + strand, within IAI46_24250 at 5171.201 kb on + strand, within IAI46_24250 at 5171.201 kb on + strand, within IAI46_24250 at 5171.202 kb on - strand, within IAI46_24250 at 5171.202 kb on - strand, within IAI46_24250 at 5171.202 kb on - strand, within IAI46_24250 at 5171.202 kb on - strand, within IAI46_24250 at 5171.307 kb on + strand, within IAI46_24250 at 5171.308 kb on - strand, within IAI46_24250 at 5171.308 kb on - strand, within IAI46_24250 at 5171.400 kb on - strand at 5171.424 kb on + strand at 5171.425 kb on - strand at 5171.425 kb on - strand at 5171.425 kb on - strand at 5171.425 kb on - strand at 5171.472 kb on + strand at 5171.472 kb on + strand at 5171.477 kb on - strand at 5171.612 kb on + strand at 5171.612 kb on + strand at 5171.613 kb on - strand at 5171.613 kb on - strand at 5171.613 kb on - strand at 5171.613 kb on - strand at 5171.677 kb on + strand, within IAI46_24255 at 5171.721 kb on + strand, within IAI46_24255 at 5171.722 kb on - strand, within IAI46_24255 at 5171.722 kb on - strand, within IAI46_24255 at 5171.765 kb on + strand, within IAI46_24255 at 5171.765 kb on + strand, within IAI46_24255 at 5171.766 kb on - strand, within IAI46_24255 at 5171.766 kb on - strand, within IAI46_24255 at 5171.816 kb on + strand, within IAI46_24255 at 5171.817 kb on - strand, within IAI46_24255 at 5171.848 kb on + strand, within IAI46_24255 at 5171.852 kb on + strand, within IAI46_24255 at 5171.853 kb on - strand, within IAI46_24255 at 5171.853 kb on - strand, within IAI46_24255 at 5171.957 kb on + strand, within IAI46_24255 at 5171.957 kb on + strand, within IAI46_24255 at 5171.957 kb on + strand, within IAI46_24255 at 5171.958 kb on - strand, within IAI46_24255 at 5171.958 kb on - strand, within IAI46_24255 at 5171.990 kb on + strand, within IAI46_24255 at 5171.991 kb on - strand, within IAI46_24255 at 5172.026 kb on + strand, within IAI46_24255 at 5172.026 kb on + strand, within IAI46_24255 at 5172.027 kb on - strand, within IAI46_24255 at 5172.027 kb on - strand, within IAI46_24255 at 5172.027 kb on - strand, within IAI46_24255 at 5172.027 kb on - strand, within IAI46_24255 at 5172.063 kb on + strand, within IAI46_24255 at 5172.063 kb on + strand, within IAI46_24255 at 5172.079 kb on + strand, within IAI46_24255 at 5172.079 kb on + strand, within IAI46_24255 at 5172.080 kb on - strand, within IAI46_24255 at 5172.098 kb on + strand, within IAI46_24255 at 5172.120 kb on + strand, within IAI46_24255 at 5172.121 kb on - strand, within IAI46_24255 at 5172.154 kb on - strand, within IAI46_24255 at 5172.154 kb on - strand, within IAI46_24255 at 5172.157 kb on + strand, within IAI46_24255 at 5172.157 kb on + strand, within IAI46_24255 at 5172.157 kb on + strand, within IAI46_24255 at 5172.157 kb on + strand, within IAI46_24255 at 5172.158 kb on - strand, within IAI46_24255 at 5172.182 kb on - strand, within IAI46_24255 at 5172.202 kb on - strand, within IAI46_24255 at 5172.202 kb on - strand, within IAI46_24255 at 5172.274 kb on - strand, within IAI46_24255 at 5172.274 kb on - strand, within IAI46_24255 at 5172.315 kb on - strand at 5172.315 kb on - strand at 5172.315 kb on - strand at 5172.319 kb on + strand at 5172.319 kb on + strand at 5172.320 kb on - strand at 5172.320 kb on - strand at 5172.460 kb on + strand at 5172.461 kb on - strand at 5172.462 kb on + strand at 5172.462 kb on + strand at 5172.463 kb on - strand at 5172.463 kb on - strand at 5172.463 kb on - strand at 5172.467 kb on + strand at 5172.467 kb on + strand at 5172.467 kb on + strand at 5172.474 kb on + strand at 5172.474 kb on + strand at 5172.474 kb on + strand at 5172.475 kb on - strand at 5172.475 kb on - strand at 5172.475 kb on - strand at 5172.475 kb on - strand at 5172.475 kb on - strand at 5172.498 kb on - strand at 5172.505 kb on + strand at 5172.505 kb on + strand at 5172.505 kb on + strand at 5172.506 kb on - strand at 5172.506 kb on - strand at 5172.507 kb on + strand at 5172.507 kb on + strand at 5172.507 kb on + strand at 5172.508 kb on - strand at 5172.509 kb on + strand at 5172.509 kb on + strand at 5172.510 kb on - strand at 5172.510 kb on - strand at 5172.560 kb on + strand at 5172.561 kb on - strand at 5172.561 kb on - strand at 5172.566 kb on + strand at 5172.595 kb on + strand at 5172.595 kb on + strand at 5172.639 kb on + strand at 5172.639 kb on + strand at 5172.639 kb on + strand at 5172.639 kb on + strand at 5172.640 kb on - strand at 5172.640 kb on - strand at 5172.640 kb on - strand at 5172.737 kb on - strand at 5172.825 kb on - strand at 5172.894 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 5,170,612 - IAI46_24250 0.48 +1.2 5,170,631 + IAI46_24250 0.49 -1.5 5,170,647 - IAI46_24250 0.50 -0.5 5,170,762 + IAI46_24250 0.56 +0.4 5,170,762 + IAI46_24250 0.56 +0.7 5,170,763 - IAI46_24250 0.56 +0.9 5,170,781 + IAI46_24250 0.57 +0.5 5,170,782 - IAI46_24250 0.57 +0.8 5,170,824 + IAI46_24250 0.60 -0.0 5,170,827 - IAI46_24250 0.60 -0.0 5,170,853 + IAI46_24250 0.61 +1.0 5,170,853 + IAI46_24250 0.61 -0.2 5,170,853 + IAI46_24250 0.61 +0.9 5,170,853 + IAI46_24250 0.61 +0.7 5,170,853 + IAI46_24250 0.61 +0.8 5,170,854 - IAI46_24250 0.61 +2.1 5,170,854 - IAI46_24250 0.61 +1.7 5,170,854 - IAI46_24250 0.61 +0.1 5,170,854 - IAI46_24250 0.61 +0.3 5,170,854 - IAI46_24250 0.61 +0.7 5,170,892 + IAI46_24250 0.63 +0.2 5,170,893 - IAI46_24250 0.64 +0.5 5,170,979 + IAI46_24250 0.68 +0.8 5,171,061 + IAI46_24250 0.73 -0.0 5,171,062 - IAI46_24250 0.73 +0.4 5,171,090 + IAI46_24250 0.75 +0.2 5,171,108 - IAI46_24250 0.76 +0.9 5,171,180 + IAI46_24250 0.80 -0.4 5,171,180 + IAI46_24250 0.80 +0.2 5,171,180 + IAI46_24250 0.80 +0.5 5,171,180 + IAI46_24250 0.80 +0.3 5,171,180 + IAI46_24250 0.80 -0.5 5,171,181 - IAI46_24250 0.80 +0.3 5,171,181 - IAI46_24250 0.80 +0.4 5,171,181 - IAI46_24250 0.80 +1.2 5,171,181 - IAI46_24250 0.80 +1.4 5,171,181 - IAI46_24250 0.80 +0.4 5,171,201 + IAI46_24250 0.81 +0.2 5,171,201 + IAI46_24250 0.81 -0.2 5,171,201 + IAI46_24250 0.81 -0.1 5,171,202 - IAI46_24250 0.81 +1.0 5,171,202 - IAI46_24250 0.81 +0.9 5,171,202 - IAI46_24250 0.81 +0.4 5,171,202 - IAI46_24250 0.81 +0.3 5,171,307 + IAI46_24250 0.87 +0.4 5,171,308 - IAI46_24250 0.87 -0.6 5,171,308 - IAI46_24250 0.87 +0.0 5,171,400 - +1.9 5,171,424 + +0.1 5,171,425 - +0.5 5,171,425 - +0.9 5,171,425 - +0.9 5,171,425 - +1.0 5,171,472 + +0.6 5,171,472 + +0.5 5,171,477 - -0.6 5,171,612 + +0.6 5,171,612 + +1.0 5,171,613 - +0.4 5,171,613 - +1.0 5,171,613 - +1.3 5,171,613 - +0.3 5,171,677 + IAI46_24255 0.17 +1.1 5,171,721 + IAI46_24255 0.22 +2.0 5,171,722 - IAI46_24255 0.22 +0.6 5,171,722 - IAI46_24255 0.22 +1.4 5,171,765 + IAI46_24255 0.27 +0.7 5,171,765 + IAI46_24255 0.27 +0.7 5,171,766 - IAI46_24255 0.27 +1.0 5,171,766 - IAI46_24255 0.27 +0.8 5,171,816 + IAI46_24255 0.33 +1.9 5,171,817 - IAI46_24255 0.33 +0.7 5,171,848 + IAI46_24255 0.37 +0.9 5,171,852 + IAI46_24255 0.37 +1.0 5,171,853 - IAI46_24255 0.38 +0.7 5,171,853 - IAI46_24255 0.38 +1.0 5,171,957 + IAI46_24255 0.50 +1.6 5,171,957 + IAI46_24255 0.50 +0.8 5,171,957 + IAI46_24255 0.50 +0.5 5,171,958 - IAI46_24255 0.50 +1.4 5,171,958 - IAI46_24255 0.50 +1.1 5,171,990 + IAI46_24255 0.54 +0.5 5,171,991 - IAI46_24255 0.54 +2.0 5,172,026 + IAI46_24255 0.58 +0.9 5,172,026 + IAI46_24255 0.58 +1.2 5,172,027 - IAI46_24255 0.58 +0.2 5,172,027 - IAI46_24255 0.58 +0.1 5,172,027 - IAI46_24255 0.58 +0.8 5,172,027 - IAI46_24255 0.58 +0.5 5,172,063 + IAI46_24255 0.62 +0.6 5,172,063 + IAI46_24255 0.62 +0.4 5,172,079 + IAI46_24255 0.64 +1.3 5,172,079 + IAI46_24255 0.64 +1.0 5,172,080 - IAI46_24255 0.64 +0.5 5,172,098 + IAI46_24255 0.66 +0.5 5,172,120 + IAI46_24255 0.69 +1.5 5,172,121 - IAI46_24255 0.69 +0.8 5,172,154 - IAI46_24255 0.73 +1.4 5,172,154 - IAI46_24255 0.73 +0.8 5,172,157 + IAI46_24255 0.73 +0.7 5,172,157 + IAI46_24255 0.73 +0.4 5,172,157 + IAI46_24255 0.73 +1.0 5,172,157 + IAI46_24255 0.73 +0.5 5,172,158 - IAI46_24255 0.73 +0.9 5,172,182 - IAI46_24255 0.76 +0.7 5,172,202 - IAI46_24255 0.79 +0.7 5,172,202 - IAI46_24255 0.79 +1.2 5,172,274 - IAI46_24255 0.87 +1.1 5,172,274 - IAI46_24255 0.87 +0.6 5,172,315 - +0.5 5,172,315 - +0.4 5,172,315 - +1.0 5,172,319 + +0.2 5,172,319 + +1.2 5,172,320 - +1.4 5,172,320 - +1.1 5,172,460 + +0.4 5,172,461 - -0.6 5,172,462 + +0.7 5,172,462 + +1.1 5,172,463 - +0.4 5,172,463 - +0.1 5,172,463 - +0.4 5,172,467 + +0.7 5,172,467 + +0.8 5,172,467 + +0.5 5,172,474 + +0.5 5,172,474 + +0.4 5,172,474 + +0.9 5,172,475 - +0.2 5,172,475 - -0.2 5,172,475 - +1.5 5,172,475 - +0.1 5,172,475 - +1.0 5,172,498 - +0.7 5,172,505 + +0.6 5,172,505 + -0.4 5,172,505 + +0.9 5,172,506 - +0.3 5,172,506 - +0.3 5,172,507 + +0.1 5,172,507 + +0.9 5,172,507 + +0.0 5,172,508 - +0.2 5,172,509 + -0.6 5,172,509 + -0.0 5,172,510 - -0.8 5,172,510 - +0.4 5,172,560 + +0.2 5,172,561 - +1.8 5,172,561 - +0.4 5,172,566 + -0.2 5,172,595 + -0.3 5,172,595 + +0.1 5,172,639 + +0.0 5,172,639 + -0.2 5,172,639 + +1.1 5,172,639 + -1.2 5,172,640 - -0.3 5,172,640 - -0.1 5,172,640 - +1.3 5,172,737 - +0.0 5,172,825 - -0.4 5,172,894 - +0.1
Or see this region's nucleotide sequence