Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15845 and IAI46_15850 overlap by 8 nucleotides IAI46_15850 and IAI46_15855 overlap by 1 nucleotides IAI46_15855 and IAI46_15860 are separated by 22 nucleotides IAI46_15860 and IAI46_15865 overlap by 4 nucleotides
IAI46_15845: IAI46_15845 - flagellar motor switch protein FliG, at 3,328,743 to 3,329,735
_15845
IAI46_15850: IAI46_15850 - flagellar assembly protein FliH, at 3,329,728 to 3,330,432
_15850
IAI46_15855: IAI46_15855 - flagellum-specific ATP synthase FliI, at 3,330,432 to 3,331,793
_15855
IAI46_15860: IAI46_15860 - flagella biosynthesis chaperone FliJ, at 3,331,816 to 3,332,262
_15860
IAI46_15865: IAI46_15865 - flagellar hook-length control protein FliK, at 3,332,259 to 3,333,473
_15865
Position (kb)
3330
3331
3332 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3329.591 kb on + strand, within IAI46_15845 at 3329.592 kb on - strand, within IAI46_15845 at 3329.660 kb on + strand at 3329.727 kb on + strand at 3329.727 kb on + strand at 3329.727 kb on + strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.745 kb on + strand at 3329.745 kb on + strand at 3329.745 kb on + strand at 3329.746 kb on - strand at 3329.746 kb on - strand at 3329.780 kb on + strand at 3330.253 kb on + strand, within IAI46_15850 at 3330.253 kb on + strand, within IAI46_15850 at 3330.430 kb on + strand at 3330.562 kb on + strand at 3330.749 kb on + strand, within IAI46_15855 at 3331.318 kb on - strand, within IAI46_15855 at 3331.620 kb on + strand, within IAI46_15855 at 3331.656 kb on + strand, within IAI46_15855 at 3331.720 kb on - strand at 3331.868 kb on + strand, within IAI46_15860 at 3331.869 kb on - strand, within IAI46_15860 at 3331.869 kb on - strand, within IAI46_15860 at 3332.020 kb on + strand, within IAI46_15860 at 3332.020 kb on + strand, within IAI46_15860 at 3332.021 kb on - strand, within IAI46_15860 at 3332.021 kb on - strand, within IAI46_15860 at 3332.252 kb on + strand at 3332.252 kb on + strand at 3332.252 kb on + strand at 3332.253 kb on - strand at 3332.253 kb on - strand at 3332.513 kb on - strand, within IAI46_15865 at 3332.556 kb on - strand, within IAI46_15865
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,329,591 + IAI46_15845 0.85 -0.6 3,329,592 - IAI46_15845 0.85 -0.3 3,329,660 + +0.6 3,329,727 + +0.2 3,329,727 + +0.6 3,329,727 + -0.1 3,329,728 - -1.3 3,329,728 - +1.3 3,329,728 - +0.3 3,329,728 - +0.9 3,329,728 - -0.5 3,329,728 - -0.8 3,329,728 - +1.1 3,329,745 + -0.9 3,329,745 + +0.6 3,329,745 + +0.5 3,329,746 - -0.3 3,329,746 - -1.5 3,329,780 + +0.4 3,330,253 + IAI46_15850 0.74 +0.6 3,330,253 + IAI46_15850 0.74 +0.1 3,330,430 + -0.8 3,330,562 + -0.5 3,330,749 + IAI46_15855 0.23 +0.0 3,331,318 - IAI46_15855 0.65 +0.4 3,331,620 + IAI46_15855 0.87 +0.1 3,331,656 + IAI46_15855 0.90 -0.1 3,331,720 - +0.2 3,331,868 + IAI46_15860 0.12 +0.9 3,331,869 - IAI46_15860 0.12 +0.8 3,331,869 - IAI46_15860 0.12 -2.4 3,332,020 + IAI46_15860 0.46 +0.5 3,332,020 + IAI46_15860 0.46 -0.6 3,332,021 - IAI46_15860 0.46 +0.5 3,332,021 - IAI46_15860 0.46 +2.0 3,332,252 + +0.3 3,332,252 + -0.7 3,332,252 + +0.2 3,332,253 - -0.4 3,332,253 - +0.8 3,332,513 - IAI46_15865 0.21 -0.3 3,332,556 - IAI46_15865 0.24 +0.7
Or see this region's nucleotide sequence