Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15000 and IAI46_15005 are separated by 214 nucleotides IAI46_15005 and IAI46_15010 are separated by 8 nucleotides IAI46_15010 and IAI46_15015 are separated by 111 nucleotides
IAI46_15000: IAI46_15000 - hypothetical protein, at 3,165,219 to 3,167,018
_15000
IAI46_15005: IAI46_15005 - hypothetical protein, at 3,167,233 to 3,167,640
_15005
IAI46_15010: IAI46_15010 - hypothetical protein, at 3,167,649 to 3,167,990
_15010
IAI46_15015: IAI46_15015 - DUF3383 domain-containing protein, at 3,168,102 to 3,169,583
_15015
Position (kb)
3167
3168 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3166.236 kb on + strand, within IAI46_15000 at 3166.237 kb on - strand, within IAI46_15000 at 3166.237 kb on - strand, within IAI46_15000 at 3166.239 kb on + strand, within IAI46_15000 at 3166.240 kb on - strand, within IAI46_15000 at 3166.252 kb on + strand, within IAI46_15000 at 3166.327 kb on - strand, within IAI46_15000 at 3166.346 kb on + strand, within IAI46_15000 at 3166.513 kb on - strand, within IAI46_15000 at 3166.547 kb on + strand, within IAI46_15000 at 3166.588 kb on - strand, within IAI46_15000 at 3166.588 kb on - strand, within IAI46_15000 at 3166.588 kb on - strand, within IAI46_15000 at 3166.596 kb on - strand, within IAI46_15000 at 3166.613 kb on + strand, within IAI46_15000 at 3166.614 kb on - strand, within IAI46_15000 at 3166.617 kb on + strand, within IAI46_15000 at 3166.618 kb on - strand, within IAI46_15000 at 3166.629 kb on + strand, within IAI46_15000 at 3166.629 kb on + strand, within IAI46_15000 at 3166.629 kb on + strand, within IAI46_15000 at 3166.630 kb on - strand, within IAI46_15000 at 3166.630 kb on - strand, within IAI46_15000 at 3166.748 kb on + strand, within IAI46_15000 at 3166.749 kb on - strand, within IAI46_15000 at 3166.769 kb on + strand, within IAI46_15000 at 3166.815 kb on - strand, within IAI46_15000 at 3166.824 kb on + strand, within IAI46_15000 at 3166.874 kb on + strand at 3167.006 kb on + strand at 3167.006 kb on + strand at 3167.006 kb on + strand at 3167.047 kb on - strand at 3167.055 kb on + strand at 3167.055 kb on + strand at 3167.055 kb on + strand at 3167.107 kb on - strand at 3167.165 kb on + strand at 3167.165 kb on + strand at 3167.177 kb on + strand at 3167.177 kb on + strand at 3167.178 kb on - strand at 3167.196 kb on - strand at 3167.196 kb on - strand at 3167.219 kb on + strand at 3167.219 kb on + strand at 3167.220 kb on - strand at 3167.287 kb on + strand, within IAI46_15005 at 3167.292 kb on + strand, within IAI46_15005 at 3167.293 kb on - strand, within IAI46_15005 at 3167.305 kb on - strand, within IAI46_15005 at 3167.497 kb on + strand, within IAI46_15005 at 3167.576 kb on + strand, within IAI46_15005 at 3167.618 kb on + strand at 3167.651 kb on - strand at 3167.657 kb on + strand at 3167.657 kb on + strand at 3167.657 kb on + strand at 3167.674 kb on - strand at 3167.700 kb on - strand, within IAI46_15010 at 3167.738 kb on + strand, within IAI46_15010 at 3167.739 kb on - strand, within IAI46_15010 at 3167.748 kb on + strand, within IAI46_15010 at 3167.769 kb on - strand, within IAI46_15010 at 3167.807 kb on + strand, within IAI46_15010 at 3167.808 kb on - strand, within IAI46_15010 at 3167.866 kb on + strand, within IAI46_15010 at 3167.867 kb on - strand, within IAI46_15010 at 3167.870 kb on + strand, within IAI46_15010 at 3167.871 kb on - strand, within IAI46_15010 at 3167.932 kb on - strand, within IAI46_15010 at 3167.932 kb on - strand, within IAI46_15010 at 3167.932 kb on - strand, within IAI46_15010 at 3167.932 kb on - strand, within IAI46_15010 at 3168.026 kb on + strand at 3168.026 kb on + strand at 3168.075 kb on - strand at 3168.157 kb on + strand at 3168.160 kb on + strand at 3168.161 kb on - strand at 3168.161 kb on - strand at 3168.254 kb on + strand, within IAI46_15015 at 3168.254 kb on + strand, within IAI46_15015 at 3168.255 kb on - strand, within IAI46_15015 at 3168.257 kb on + strand, within IAI46_15015 at 3168.257 kb on + strand, within IAI46_15015 at 3168.258 kb on - strand, within IAI46_15015 at 3168.398 kb on - strand, within IAI46_15015 at 3168.403 kb on + strand, within IAI46_15015 at 3168.404 kb on - strand, within IAI46_15015 at 3168.483 kb on + strand, within IAI46_15015 at 3168.548 kb on + strand, within IAI46_15015 at 3168.549 kb on - strand, within IAI46_15015 at 3168.549 kb on - strand, within IAI46_15015 at 3168.549 kb on - strand, within IAI46_15015 at 3168.549 kb on - strand, within IAI46_15015 at 3168.549 kb on - strand, within IAI46_15015 at 3168.569 kb on - strand, within IAI46_15015 at 3168.569 kb on - strand, within IAI46_15015 at 3168.592 kb on + strand, within IAI46_15015 at 3168.609 kb on - strand, within IAI46_15015
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,166,236 + IAI46_15000 0.56 +0.5 3,166,237 - IAI46_15000 0.57 +0.1 3,166,237 - IAI46_15000 0.57 -0.2 3,166,239 + IAI46_15000 0.57 -0.7 3,166,240 - IAI46_15000 0.57 +2.0 3,166,252 + IAI46_15000 0.57 +0.2 3,166,327 - IAI46_15000 0.62 +0.5 3,166,346 + IAI46_15000 0.63 -0.1 3,166,513 - IAI46_15000 0.72 -0.4 3,166,547 + IAI46_15000 0.74 +0.2 3,166,588 - IAI46_15000 0.76 +0.3 3,166,588 - IAI46_15000 0.76 +0.6 3,166,588 - IAI46_15000 0.76 -1.1 3,166,596 - IAI46_15000 0.77 -1.4 3,166,613 + IAI46_15000 0.77 -0.3 3,166,614 - IAI46_15000 0.78 -0.6 3,166,617 + IAI46_15000 0.78 -0.4 3,166,618 - IAI46_15000 0.78 -0.4 3,166,629 + IAI46_15000 0.78 -1.0 3,166,629 + IAI46_15000 0.78 -0.7 3,166,629 + IAI46_15000 0.78 +0.6 3,166,630 - IAI46_15000 0.78 +0.5 3,166,630 - IAI46_15000 0.78 -0.7 3,166,748 + IAI46_15000 0.85 +0.2 3,166,749 - IAI46_15000 0.85 -1.0 3,166,769 + IAI46_15000 0.86 +0.3 3,166,815 - IAI46_15000 0.89 +1.0 3,166,824 + IAI46_15000 0.89 -0.0 3,166,874 + -0.4 3,167,006 + +0.3 3,167,006 + +0.8 3,167,006 + +0.5 3,167,047 - -0.3 3,167,055 + +0.6 3,167,055 + -1.1 3,167,055 + +0.2 3,167,107 - +0.3 3,167,165 + +1.0 3,167,165 + +1.2 3,167,177 + -0.1 3,167,177 + -0.1 3,167,178 - +0.9 3,167,196 - +0.1 3,167,196 - -1.4 3,167,219 + +0.1 3,167,219 + +0.5 3,167,220 - +0.5 3,167,287 + IAI46_15005 0.13 -0.2 3,167,292 + IAI46_15005 0.14 +0.4 3,167,293 - IAI46_15005 0.15 +0.7 3,167,305 - IAI46_15005 0.18 +0.8 3,167,497 + IAI46_15005 0.65 +1.7 3,167,576 + IAI46_15005 0.84 +1.3 3,167,618 + +1.5 3,167,651 - -0.7 3,167,657 + +1.1 3,167,657 + +0.2 3,167,657 + +0.7 3,167,674 - -0.7 3,167,700 - IAI46_15010 0.15 -0.2 3,167,738 + IAI46_15010 0.26 -0.9 3,167,739 - IAI46_15010 0.26 -0.4 3,167,748 + IAI46_15010 0.29 +0.1 3,167,769 - IAI46_15010 0.35 -0.1 3,167,807 + IAI46_15010 0.46 -0.1 3,167,808 - IAI46_15010 0.46 +1.5 3,167,866 + IAI46_15010 0.63 +1.0 3,167,867 - IAI46_15010 0.64 -0.1 3,167,870 + IAI46_15010 0.65 +0.2 3,167,871 - IAI46_15010 0.65 +1.0 3,167,932 - IAI46_15010 0.83 +1.5 3,167,932 - IAI46_15010 0.83 -0.0 3,167,932 - IAI46_15010 0.83 -0.9 3,167,932 - IAI46_15010 0.83 +1.2 3,168,026 + +0.1 3,168,026 + +0.4 3,168,075 - -0.1 3,168,157 + -0.4 3,168,160 + +0.5 3,168,161 - +1.5 3,168,161 - +0.3 3,168,254 + IAI46_15015 0.10 +1.5 3,168,254 + IAI46_15015 0.10 +0.1 3,168,255 - IAI46_15015 0.10 +0.8 3,168,257 + IAI46_15015 0.10 +0.6 3,168,257 + IAI46_15015 0.10 -0.1 3,168,258 - IAI46_15015 0.11 +0.5 3,168,398 - IAI46_15015 0.20 -0.3 3,168,403 + IAI46_15015 0.20 -0.9 3,168,404 - IAI46_15015 0.20 -1.1 3,168,483 + IAI46_15015 0.26 -0.1 3,168,548 + IAI46_15015 0.30 +0.9 3,168,549 - IAI46_15015 0.30 -1.2 3,168,549 - IAI46_15015 0.30 -0.7 3,168,549 - IAI46_15015 0.30 +0.1 3,168,549 - IAI46_15015 0.30 -1.0 3,168,549 - IAI46_15015 0.30 -2.3 3,168,569 - IAI46_15015 0.32 -0.9 3,168,569 - IAI46_15015 0.32 -0.1 3,168,592 + IAI46_15015 0.33 +0.6 3,168,609 - IAI46_15015 0.34 +0.8
Or see this region's nucleotide sequence