Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14325 and IAI46_14330 are separated by 93 nucleotides IAI46_14330 and IAI46_14335 are separated by 24 nucleotides IAI46_14335 and IAI46_14340 are separated by 231 nucleotides
IAI46_14325: IAI46_14325 - signal peptide peptidase SppA, at 3,038,893 to 3,040,749
_14325
IAI46_14330: IAI46_14330 - asparaginase, at 3,040,843 to 3,041,859
_14330
IAI46_14335: IAI46_14335 - bifunctional nicotinamidase/pyrazinamidase, at 3,041,884 to 3,042,516
_14335
IAI46_14340: IAI46_14340 - glycoside hydrolase family 18 protein, at 3,042,748 to 3,044,028
_14340
Position (kb)
3040
3041
3042 Strain fitness (log2 ratio)
-1
0
1 at 3040.186 kb on - strand, within IAI46_14325 at 3040.534 kb on - strand, within IAI46_14325 at 3040.806 kb on + strand at 3040.807 kb on - strand at 3040.831 kb on - strand at 3040.870 kb on + strand at 3041.003 kb on - strand, within IAI46_14330 at 3041.087 kb on - strand, within IAI46_14330 at 3041.323 kb on - strand, within IAI46_14330 at 3041.843 kb on + strand at 3041.844 kb on - strand at 3042.057 kb on + strand, within IAI46_14335 at 3042.144 kb on - strand, within IAI46_14335 at 3042.222 kb on + strand, within IAI46_14335 at 3042.222 kb on + strand, within IAI46_14335 at 3042.222 kb on + strand, within IAI46_14335 at 3042.238 kb on + strand, within IAI46_14335 at 3042.344 kb on - strand, within IAI46_14335 at 3042.399 kb on - strand, within IAI46_14335 at 3042.423 kb on + strand, within IAI46_14335 at 3042.514 kb on + strand at 3042.663 kb on - strand at 3042.663 kb on - strand at 3042.664 kb on + strand at 3042.664 kb on + strand at 3042.694 kb on + strand at 3042.699 kb on + strand at 3042.744 kb on + strand at 3042.745 kb on - strand at 3042.832 kb on + strand at 3042.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,040,186 - IAI46_14325 0.70 +1.0 3,040,534 - IAI46_14325 0.88 +0.7 3,040,806 + +1.2 3,040,807 - +1.4 3,040,831 - +0.0 3,040,870 + -0.1 3,041,003 - IAI46_14330 0.16 +0.4 3,041,087 - IAI46_14330 0.24 -0.6 3,041,323 - IAI46_14330 0.47 -0.3 3,041,843 + +0.3 3,041,844 - +0.0 3,042,057 + IAI46_14335 0.27 +0.1 3,042,144 - IAI46_14335 0.41 +0.3 3,042,222 + IAI46_14335 0.53 -1.3 3,042,222 + IAI46_14335 0.53 +0.6 3,042,222 + IAI46_14335 0.53 -0.1 3,042,238 + IAI46_14335 0.56 -0.6 3,042,344 - IAI46_14335 0.73 -0.0 3,042,399 - IAI46_14335 0.81 +1.6 3,042,423 + IAI46_14335 0.85 +0.4 3,042,514 + -0.3 3,042,663 - -0.6 3,042,663 - +0.6 3,042,664 + +0.7 3,042,664 + +1.2 3,042,694 + -0.2 3,042,699 + -0.5 3,042,744 + +1.0 3,042,745 - +0.5 3,042,832 + +1.0 3,042,833 - +1.4
Or see this region's nucleotide sequence