Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11850 and IAI46_11855 are separated by 111 nucleotides IAI46_11855 and IAI46_11860 are separated by 766 nucleotides
IAI46_11850: IAI46_11850 - LysR family transcriptional regulator, at 2,505,742 to 2,506,623
_11850
IAI46_11855: IAI46_11855 - sulfite exporter TauE/SafE family protein, at 2,506,735 to 2,507,481
_11855
IAI46_11860: IAI46_11860 - HlyD family efflux transporter periplasmic adaptor subunit, at 2,508,248 to 2,509,516
_11860
Position (kb)
2506
2507
2508 Strain fitness (log2 ratio)
-2
-1
0
1 at 2505.808 kb on + strand at 2505.808 kb on + strand at 2505.809 kb on - strand at 2505.809 kb on - strand at 2505.967 kb on + strand, within IAI46_11850 at 2506.045 kb on - strand, within IAI46_11850 at 2506.052 kb on + strand, within IAI46_11850 at 2506.053 kb on - strand, within IAI46_11850 at 2506.053 kb on - strand, within IAI46_11850 at 2506.053 kb on - strand, within IAI46_11850 at 2506.145 kb on + strand, within IAI46_11850 at 2506.280 kb on + strand, within IAI46_11850 at 2506.281 kb on - strand, within IAI46_11850 at 2506.402 kb on + strand, within IAI46_11850 at 2506.403 kb on - strand, within IAI46_11850 at 2506.634 kb on + strand at 2506.634 kb on + strand at 2506.634 kb on + strand at 2506.728 kb on + strand at 2506.728 kb on + strand at 2506.734 kb on + strand at 2506.735 kb on - strand at 2506.735 kb on - strand at 2506.735 kb on - strand at 2506.735 kb on - strand at 2506.779 kb on + strand at 2507.068 kb on + strand, within IAI46_11855 at 2507.147 kb on + strand, within IAI46_11855 at 2507.203 kb on + strand, within IAI46_11855 at 2507.692 kb on + strand at 2507.895 kb on + strand at 2507.899 kb on + strand at 2508.154 kb on + strand at 2508.158 kb on + strand at 2508.240 kb on + strand at 2508.240 kb on + strand at 2508.321 kb on + strand at 2508.321 kb on + strand at 2508.414 kb on - strand, within IAI46_11860 at 2508.471 kb on + strand, within IAI46_11860
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,505,808 + -0.5 2,505,808 + -1.7 2,505,809 - +0.9 2,505,809 - -2.6 2,505,967 + IAI46_11850 0.26 -0.3 2,506,045 - IAI46_11850 0.34 -0.4 2,506,052 + IAI46_11850 0.35 +1.1 2,506,053 - IAI46_11850 0.35 +0.7 2,506,053 - IAI46_11850 0.35 +0.5 2,506,053 - IAI46_11850 0.35 +0.4 2,506,145 + IAI46_11850 0.46 +0.1 2,506,280 + IAI46_11850 0.61 -0.1 2,506,281 - IAI46_11850 0.61 +0.3 2,506,402 + IAI46_11850 0.75 +0.5 2,506,403 - IAI46_11850 0.75 -1.0 2,506,634 + +0.1 2,506,634 + -0.5 2,506,634 + +0.7 2,506,728 + -0.4 2,506,728 + -0.2 2,506,734 + -1.4 2,506,735 - +0.6 2,506,735 - +1.0 2,506,735 - -1.1 2,506,735 - -1.1 2,506,779 + -0.2 2,507,068 + IAI46_11855 0.45 +0.0 2,507,147 + IAI46_11855 0.55 -0.1 2,507,203 + IAI46_11855 0.63 +0.6 2,507,692 + -0.1 2,507,895 + +0.6 2,507,899 + -1.1 2,508,154 + +0.4 2,508,158 + +1.3 2,508,240 + +0.1 2,508,240 + -0.2 2,508,321 + +0.8 2,508,321 + +0.1 2,508,414 - IAI46_11860 0.13 -0.6 2,508,471 + IAI46_11860 0.18 +0.8
Or see this region's nucleotide sequence