Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11750 and IAI46_11755 overlap by 1 nucleotides IAI46_11755 and IAI46_11760 are separated by 20 nucleotides IAI46_11760 and IAI46_11765 overlap by 11 nucleotides
IAI46_11750: IAI46_11750 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,479,660 to 2,480,739
_11750
IAI46_11755: IAI46_11755 - carbohydrate kinase family protein, at 2,480,739 to 2,481,692
_11755
IAI46_11760: IAI46_11760 - carbohydrate ABC transporter permease, at 2,481,713 to 2,482,552
_11760
IAI46_11765: IAI46_11765 - sugar ABC transporter permease, at 2,482,542 to 2,483,450
_11765
Position (kb)
2480
2481
2482 Strain fitness (log2 ratio)
-2
-1
0
1 at 2479.774 kb on + strand, within IAI46_11750 at 2480.174 kb on + strand, within IAI46_11750 at 2480.175 kb on - strand, within IAI46_11750 at 2480.175 kb on - strand, within IAI46_11750 at 2480.278 kb on + strand, within IAI46_11750 at 2480.290 kb on - strand, within IAI46_11750 at 2480.351 kb on + strand, within IAI46_11750 at 2480.480 kb on + strand, within IAI46_11750 at 2480.481 kb on - strand, within IAI46_11750 at 2480.481 kb on - strand, within IAI46_11750 at 2480.829 kb on - strand at 2481.344 kb on + strand, within IAI46_11755 at 2481.345 kb on - strand, within IAI46_11755 at 2481.478 kb on + strand, within IAI46_11755 at 2481.479 kb on - strand, within IAI46_11755 at 2481.661 kb on + strand at 2481.662 kb on - strand at 2481.697 kb on - strand at 2481.709 kb on + strand at 2482.130 kb on - strand, within IAI46_11760 at 2482.168 kb on - strand, within IAI46_11760 at 2482.203 kb on + strand, within IAI46_11760 at 2482.203 kb on + strand, within IAI46_11760 at 2482.204 kb on - strand, within IAI46_11760 at 2482.204 kb on - strand, within IAI46_11760 at 2482.387 kb on - strand, within IAI46_11760 at 2482.595 kb on - strand at 2482.667 kb on - strand, within IAI46_11765
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,479,774 + IAI46_11750 0.11 +0.1 2,480,174 + IAI46_11750 0.48 -1.3 2,480,175 - IAI46_11750 0.48 -0.9 2,480,175 - IAI46_11750 0.48 +0.4 2,480,278 + IAI46_11750 0.57 +1.7 2,480,290 - IAI46_11750 0.58 -0.6 2,480,351 + IAI46_11750 0.64 -2.6 2,480,480 + IAI46_11750 0.76 +0.9 2,480,481 - IAI46_11750 0.76 +1.3 2,480,481 - IAI46_11750 0.76 -0.2 2,480,829 - -0.8 2,481,344 + IAI46_11755 0.63 +0.9 2,481,345 - IAI46_11755 0.64 -0.5 2,481,478 + IAI46_11755 0.77 -0.3 2,481,479 - IAI46_11755 0.78 +0.4 2,481,661 + +0.1 2,481,662 - +0.4 2,481,697 - +0.5 2,481,709 + -0.0 2,482,130 - IAI46_11760 0.50 +0.9 2,482,168 - IAI46_11760 0.54 -0.3 2,482,203 + IAI46_11760 0.58 +0.2 2,482,203 + IAI46_11760 0.58 -0.3 2,482,204 - IAI46_11760 0.58 +1.4 2,482,204 - IAI46_11760 0.58 +0.1 2,482,387 - IAI46_11760 0.80 +0.3 2,482,595 - +0.2 2,482,667 - IAI46_11765 0.14 +0.3
Or see this region's nucleotide sequence