Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07115 and IAI46_07120 are separated by 41 nucleotides IAI46_07120 and IAI46_07125 are separated by 81 nucleotides IAI46_07125 and IAI46_07130 are separated by 129 nucleotides
IAI46_07115: IAI46_07115 - cysteine hydrolase, at 1,501,964 to 1,502,491
_07115
IAI46_07120: IAI46_07120 - NAD(P)-dependent oxidoreductase, at 1,502,533 to 1,503,408
_07120
IAI46_07125: IAI46_07125 - SDR family oxidoreductase, at 1,503,490 to 1,504,236
_07125
IAI46_07130: IAI46_07130 - LysR family transcriptional regulator, at 1,504,366 to 1,505,301
_07130
Position (kb)
1503
1504
1505 Strain fitness (log2 ratio)
-1
0
1 at 1502.525 kb on + strand at 1502.526 kb on - strand at 1502.534 kb on + strand at 1502.535 kb on - strand at 1502.629 kb on + strand, within IAI46_07120 at 1502.630 kb on - strand, within IAI46_07120 at 1502.678 kb on - strand, within IAI46_07120 at 1502.710 kb on + strand, within IAI46_07120 at 1502.768 kb on + strand, within IAI46_07120 at 1502.768 kb on + strand, within IAI46_07120 at 1502.768 kb on + strand, within IAI46_07120 at 1502.769 kb on - strand, within IAI46_07120 at 1502.831 kb on + strand, within IAI46_07120 at 1502.905 kb on - strand, within IAI46_07120 at 1503.015 kb on + strand, within IAI46_07120 at 1503.069 kb on + strand, within IAI46_07120 at 1503.069 kb on + strand, within IAI46_07120 at 1503.071 kb on + strand, within IAI46_07120 at 1503.072 kb on - strand, within IAI46_07120 at 1503.072 kb on - strand, within IAI46_07120 at 1503.095 kb on - strand, within IAI46_07120 at 1503.235 kb on + strand, within IAI46_07120 at 1503.235 kb on + strand, within IAI46_07120 at 1503.235 kb on + strand, within IAI46_07120 at 1503.236 kb on - strand, within IAI46_07120 at 1503.236 kb on - strand, within IAI46_07120 at 1503.332 kb on - strand at 1503.431 kb on - strand at 1503.480 kb on + strand at 1503.481 kb on - strand at 1504.154 kb on + strand, within IAI46_07125 at 1504.224 kb on + strand at 1504.224 kb on + strand at 1504.225 kb on - strand at 1504.318 kb on + strand at 1504.327 kb on + strand at 1504.332 kb on + strand at 1504.333 kb on - strand at 1504.333 kb on - strand at 1504.336 kb on + strand at 1504.336 kb on + strand at 1504.377 kb on - strand at 1505.161 kb on - strand, within IAI46_07130 at 1505.175 kb on + strand, within IAI46_07130 at 1505.175 kb on + strand, within IAI46_07130 at 1505.175 kb on + strand, within IAI46_07130 at 1505.175 kb on + strand, within IAI46_07130 at 1505.175 kb on + strand, within IAI46_07130 at 1505.175 kb on + strand, within IAI46_07130 at 1505.192 kb on + strand, within IAI46_07130
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,502,525 + -0.1 1,502,526 - +0.2 1,502,534 + +0.2 1,502,535 - +0.6 1,502,629 + IAI46_07120 0.11 -0.2 1,502,630 - IAI46_07120 0.11 -0.6 1,502,678 - IAI46_07120 0.17 +0.3 1,502,710 + IAI46_07120 0.20 -0.2 1,502,768 + IAI46_07120 0.27 -0.2 1,502,768 + IAI46_07120 0.27 +0.8 1,502,768 + IAI46_07120 0.27 +0.1 1,502,769 - IAI46_07120 0.27 -0.0 1,502,831 + IAI46_07120 0.34 +0.7 1,502,905 - IAI46_07120 0.42 +1.5 1,503,015 + IAI46_07120 0.55 +0.1 1,503,069 + IAI46_07120 0.61 +1.1 1,503,069 + IAI46_07120 0.61 +0.3 1,503,071 + IAI46_07120 0.61 -0.1 1,503,072 - IAI46_07120 0.62 +0.8 1,503,072 - IAI46_07120 0.62 -0.4 1,503,095 - IAI46_07120 0.64 -1.5 1,503,235 + IAI46_07120 0.80 +0.1 1,503,235 + IAI46_07120 0.80 +0.4 1,503,235 + IAI46_07120 0.80 -0.0 1,503,236 - IAI46_07120 0.80 +0.5 1,503,236 - IAI46_07120 0.80 -0.2 1,503,332 - +0.6 1,503,431 - -0.7 1,503,480 + +0.4 1,503,481 - -0.6 1,504,154 + IAI46_07125 0.89 -0.2 1,504,224 + +0.1 1,504,224 + -0.6 1,504,225 - +0.4 1,504,318 + +0.2 1,504,327 + +0.5 1,504,332 + +1.1 1,504,333 - +0.0 1,504,333 - +0.6 1,504,336 + -0.7 1,504,336 + -0.5 1,504,377 - -0.3 1,505,161 - IAI46_07130 0.85 +0.8 1,505,175 + IAI46_07130 0.86 -0.0 1,505,175 + IAI46_07130 0.86 -0.8 1,505,175 + IAI46_07130 0.86 +0.2 1,505,175 + IAI46_07130 0.86 +0.2 1,505,175 + IAI46_07130 0.86 +0.4 1,505,175 + IAI46_07130 0.86 -0.4 1,505,192 + IAI46_07130 0.88 +0.4
Or see this region's nucleotide sequence