Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06300 and IAI46_06305 are separated by 17 nucleotides IAI46_06305 and IAI46_06310 overlap by 1 nucleotides IAI46_06310 and IAI46_06315 are separated by 130 nucleotides IAI46_06315 and IAI46_06320 overlap by 4 nucleotides IAI46_06320 and IAI46_06325 are separated by 12 nucleotides
IAI46_06300: IAI46_06300 - cytochrome d ubiquinol oxidase subunit II, at 1,351,027 to 1,352,166
_06300
IAI46_06305: IAI46_06305 - cytochrome bd-I oxidase subunit CydX, at 1,352,184 to 1,352,297
_06305
IAI46_06310: IAI46_06310 - cyd operon protein YbgE, at 1,352,297 to 1,352,593
_06310
IAI46_06315: IAI46_06315 - tol-pal system-associated acyl-CoA thioesterase, at 1,352,724 to 1,353,128
_06315
IAI46_06320: IAI46_06320 - Tol-Pal system protein TolQ, at 1,353,125 to 1,353,808
_06320
IAI46_06325: IAI46_06325 - colicin uptake protein TolR, at 1,353,821 to 1,354,249
_06325
Position (kb)
1352
1353
1354 Strain fitness (log2 ratio)
-2
-1
0
1 at 1351.990 kb on - strand, within IAI46_06300 at 1352.102 kb on - strand at 1352.104 kb on + strand at 1352.164 kb on + strand at 1352.165 kb on - strand at 1352.178 kb on + strand at 1352.178 kb on + strand at 1352.292 kb on - strand at 1352.311 kb on - strand at 1352.325 kb on - strand at 1352.579 kb on + strand at 1352.590 kb on - strand at 1352.603 kb on + strand at 1352.604 kb on - strand at 1352.633 kb on + strand at 1352.634 kb on - strand at 1352.656 kb on + strand at 1352.687 kb on - strand at 1352.688 kb on + strand at 1352.688 kb on + strand at 1352.688 kb on + strand at 1352.691 kb on + strand at 1352.691 kb on + strand at 1352.692 kb on - strand at 1352.700 kb on + strand at 1352.701 kb on - strand at 1352.720 kb on + strand at 1352.729 kb on + strand at 1352.732 kb on + strand at 1352.793 kb on + strand, within IAI46_06315 at 1352.805 kb on + strand, within IAI46_06315 at 1352.919 kb on + strand, within IAI46_06315 at 1353.098 kb on + strand at 1353.098 kb on + strand at 1353.104 kb on + strand at 1353.104 kb on + strand at 1353.105 kb on - strand at 1353.119 kb on + strand at 1353.539 kb on + strand, within IAI46_06320 at 1353.571 kb on + strand, within IAI46_06320 at 1353.698 kb on + strand, within IAI46_06320 at 1353.806 kb on + strand at 1353.810 kb on + strand at 1353.817 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,351,990 - IAI46_06300 0.84 -0.4 1,352,102 - +1.6 1,352,104 + +0.2 1,352,164 + +0.4 1,352,165 - +1.3 1,352,178 + +0.4 1,352,178 + +0.2 1,352,292 - +1.5 1,352,311 - -0.1 1,352,325 - -0.2 1,352,579 + -0.3 1,352,590 - -1.1 1,352,603 + +0.3 1,352,604 - +1.0 1,352,633 + -0.2 1,352,634 - +0.3 1,352,656 + +0.7 1,352,687 - -2.1 1,352,688 + +1.5 1,352,688 + +0.8 1,352,688 + +0.0 1,352,691 + -0.5 1,352,691 + +0.4 1,352,692 - +0.2 1,352,700 + -0.3 1,352,701 - -0.1 1,352,720 + +0.5 1,352,729 + +0.9 1,352,732 + +0.6 1,352,793 + IAI46_06315 0.17 +0.4 1,352,805 + IAI46_06315 0.20 +0.2 1,352,919 + IAI46_06315 0.48 +0.3 1,353,098 + -1.4 1,353,098 + -0.8 1,353,104 + -0.3 1,353,104 + -0.3 1,353,105 - -1.7 1,353,119 + -0.1 1,353,539 + IAI46_06320 0.61 -0.9 1,353,571 + IAI46_06320 0.65 -1.9 1,353,698 + IAI46_06320 0.84 -1.3 1,353,806 + -0.5 1,353,810 + -0.4 1,353,817 + +0.6
Or see this region's nucleotide sequence