Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04835 and IAI46_04840 are separated by 72 nucleotides IAI46_04840 and IAI46_04845 are separated by 33 nucleotides IAI46_04845 and IAI46_04850 are separated by 25 nucleotides
IAI46_04835: IAI46_04835 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 1,041,677 to 1,042,747
_04835
IAI46_04840: IAI46_04840 - tRNA guanosine(34) transglycosylase Tgt, at 1,042,820 to 1,043,944
_04840
IAI46_04845: IAI46_04845 - preprotein translocase subunit YajC, at 1,043,978 to 1,044,310
_04845
IAI46_04850: IAI46_04850 - protein translocase subunit SecD, at 1,044,336 to 1,046,183
_04850
Position (kb)
1042
1043
1044 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1041.979 kb on + strand, within IAI46_04835 at 1041.979 kb on + strand, within IAI46_04835 at 1041.979 kb on + strand, within IAI46_04835 at 1041.980 kb on - strand, within IAI46_04835 at 1042.048 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.130 kb on + strand, within IAI46_04835 at 1042.131 kb on - strand, within IAI46_04835 at 1042.131 kb on - strand, within IAI46_04835 at 1042.133 kb on - strand, within IAI46_04835 at 1042.169 kb on + strand, within IAI46_04835 at 1042.181 kb on + strand, within IAI46_04835 at 1042.181 kb on + strand, within IAI46_04835 at 1042.182 kb on - strand, within IAI46_04835 at 1042.361 kb on + strand, within IAI46_04835 at 1042.395 kb on + strand, within IAI46_04835 at 1042.396 kb on - strand, within IAI46_04835 at 1042.396 kb on - strand, within IAI46_04835 at 1042.396 kb on - strand, within IAI46_04835 at 1042.405 kb on + strand, within IAI46_04835 at 1042.405 kb on + strand, within IAI46_04835 at 1042.406 kb on - strand, within IAI46_04835 at 1042.492 kb on - strand, within IAI46_04835 at 1042.525 kb on + strand, within IAI46_04835 at 1042.525 kb on + strand, within IAI46_04835 at 1042.526 kb on - strand, within IAI46_04835 at 1042.526 kb on - strand, within IAI46_04835 at 1042.526 kb on - strand, within IAI46_04835 at 1042.526 kb on - strand, within IAI46_04835 at 1042.544 kb on + strand, within IAI46_04835 at 1042.600 kb on + strand, within IAI46_04835 at 1042.647 kb on - strand at 1042.647 kb on - strand at 1042.686 kb on - strand at 1042.783 kb on - strand at 1042.841 kb on - strand at 1042.841 kb on - strand at 1042.906 kb on + strand at 1042.922 kb on + strand at 1042.932 kb on + strand at 1043.213 kb on + strand, within IAI46_04840 at 1043.213 kb on + strand, within IAI46_04840 at 1043.214 kb on - strand, within IAI46_04840 at 1043.254 kb on + strand, within IAI46_04840 at 1043.254 kb on + strand, within IAI46_04840 at 1043.279 kb on + strand, within IAI46_04840 at 1043.350 kb on + strand, within IAI46_04840 at 1043.351 kb on - strand, within IAI46_04840 at 1043.351 kb on - strand, within IAI46_04840 at 1043.374 kb on + strand, within IAI46_04840 at 1043.400 kb on + strand, within IAI46_04840 at 1043.415 kb on + strand, within IAI46_04840 at 1043.416 kb on - strand, within IAI46_04840 at 1043.533 kb on + strand, within IAI46_04840 at 1043.533 kb on + strand, within IAI46_04840 at 1043.602 kb on + strand, within IAI46_04840 at 1043.603 kb on - strand, within IAI46_04840 at 1043.629 kb on + strand, within IAI46_04840 at 1043.630 kb on - strand, within IAI46_04840 at 1043.630 kb on - strand, within IAI46_04840 at 1043.701 kb on + strand, within IAI46_04840 at 1043.701 kb on + strand, within IAI46_04840 at 1043.701 kb on + strand, within IAI46_04840 at 1043.701 kb on + strand, within IAI46_04840 at 1043.702 kb on - strand, within IAI46_04840 at 1043.702 kb on - strand, within IAI46_04840 at 1043.732 kb on + strand, within IAI46_04840 at 1043.732 kb on + strand, within IAI46_04840 at 1043.732 kb on + strand, within IAI46_04840 at 1043.733 kb on - strand, within IAI46_04840 at 1043.734 kb on + strand, within IAI46_04840 at 1043.734 kb on + strand, within IAI46_04840 at 1043.734 kb on + strand, within IAI46_04840 at 1043.734 kb on + strand, within IAI46_04840 at 1043.735 kb on - strand, within IAI46_04840 at 1043.735 kb on - strand, within IAI46_04840 at 1043.735 kb on - strand, within IAI46_04840 at 1043.748 kb on - strand, within IAI46_04840 at 1043.759 kb on + strand, within IAI46_04840 at 1043.759 kb on + strand, within IAI46_04840 at 1043.832 kb on - strand at 1043.962 kb on + strand at 1043.962 kb on + strand at 1044.052 kb on + strand, within IAI46_04845 at 1044.052 kb on + strand, within IAI46_04845 at 1044.052 kb on + strand, within IAI46_04845 at 1044.115 kb on + strand, within IAI46_04845 at 1044.308 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,041,979 + IAI46_04835 0.28 -0.6 1,041,979 + IAI46_04835 0.28 -0.1 1,041,979 + IAI46_04835 0.28 -0.7 1,041,980 - IAI46_04835 0.28 +1.5 1,042,048 + IAI46_04835 0.35 +0.5 1,042,130 + IAI46_04835 0.42 +0.1 1,042,130 + IAI46_04835 0.42 -0.1 1,042,130 + IAI46_04835 0.42 -0.7 1,042,130 + IAI46_04835 0.42 -0.1 1,042,130 + IAI46_04835 0.42 +1.0 1,042,130 + IAI46_04835 0.42 +0.2 1,042,131 - IAI46_04835 0.42 +0.9 1,042,131 - IAI46_04835 0.42 +0.3 1,042,133 - IAI46_04835 0.43 -1.2 1,042,169 + IAI46_04835 0.46 +0.0 1,042,181 + IAI46_04835 0.47 -0.7 1,042,181 + IAI46_04835 0.47 -0.3 1,042,182 - IAI46_04835 0.47 +0.1 1,042,361 + IAI46_04835 0.64 +1.6 1,042,395 + IAI46_04835 0.67 +0.2 1,042,396 - IAI46_04835 0.67 -0.0 1,042,396 - IAI46_04835 0.67 +0.5 1,042,396 - IAI46_04835 0.67 -2.0 1,042,405 + IAI46_04835 0.68 +0.3 1,042,405 + IAI46_04835 0.68 +0.4 1,042,406 - IAI46_04835 0.68 -1.0 1,042,492 - IAI46_04835 0.76 +0.7 1,042,525 + IAI46_04835 0.79 +1.1 1,042,525 + IAI46_04835 0.79 -1.5 1,042,526 - IAI46_04835 0.79 -1.1 1,042,526 - IAI46_04835 0.79 -0.1 1,042,526 - IAI46_04835 0.79 +0.1 1,042,526 - IAI46_04835 0.79 +1.1 1,042,544 + IAI46_04835 0.81 -1.2 1,042,600 + IAI46_04835 0.86 +0.5 1,042,647 - -0.4 1,042,647 - -1.9 1,042,686 - -0.1 1,042,783 - +0.5 1,042,841 - +0.8 1,042,841 - -0.2 1,042,906 + -0.2 1,042,922 + -0.7 1,042,932 + -0.7 1,043,213 + IAI46_04840 0.35 -0.5 1,043,213 + IAI46_04840 0.35 -3.1 1,043,214 - IAI46_04840 0.35 -0.1 1,043,254 + IAI46_04840 0.39 +0.4 1,043,254 + IAI46_04840 0.39 -0.6 1,043,279 + IAI46_04840 0.41 -0.4 1,043,350 + IAI46_04840 0.47 -0.4 1,043,351 - IAI46_04840 0.47 -0.2 1,043,351 - IAI46_04840 0.47 -0.4 1,043,374 + IAI46_04840 0.49 -0.8 1,043,400 + IAI46_04840 0.52 +0.6 1,043,415 + IAI46_04840 0.53 -0.3 1,043,416 - IAI46_04840 0.53 +1.5 1,043,533 + IAI46_04840 0.63 -0.9 1,043,533 + IAI46_04840 0.63 +0.1 1,043,602 + IAI46_04840 0.70 -0.2 1,043,603 - IAI46_04840 0.70 -0.9 1,043,629 + IAI46_04840 0.72 +0.7 1,043,630 - IAI46_04840 0.72 -1.6 1,043,630 - IAI46_04840 0.72 +0.6 1,043,701 + IAI46_04840 0.78 -0.3 1,043,701 + IAI46_04840 0.78 +1.4 1,043,701 + IAI46_04840 0.78 +0.6 1,043,701 + IAI46_04840 0.78 +0.2 1,043,702 - IAI46_04840 0.78 -0.8 1,043,702 - IAI46_04840 0.78 -0.7 1,043,732 + IAI46_04840 0.81 +0.4 1,043,732 + IAI46_04840 0.81 +0.3 1,043,732 + IAI46_04840 0.81 -0.5 1,043,733 - IAI46_04840 0.81 +0.3 1,043,734 + IAI46_04840 0.81 -0.3 1,043,734 + IAI46_04840 0.81 +0.1 1,043,734 + IAI46_04840 0.81 -0.9 1,043,734 + IAI46_04840 0.81 -1.4 1,043,735 - IAI46_04840 0.81 +0.1 1,043,735 - IAI46_04840 0.81 +0.0 1,043,735 - IAI46_04840 0.81 -0.3 1,043,748 - IAI46_04840 0.82 -1.3 1,043,759 + IAI46_04840 0.83 +0.7 1,043,759 + IAI46_04840 0.83 -0.3 1,043,832 - +0.1 1,043,962 + -0.1 1,043,962 + -0.2 1,044,052 + IAI46_04845 0.22 -0.2 1,044,052 + IAI46_04845 0.22 +0.8 1,044,052 + IAI46_04845 0.22 +0.5 1,044,115 + IAI46_04845 0.41 -0.5 1,044,308 + -0.9
Or see this region's nucleotide sequence