Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03700 and IAI46_03705 are separated by 275 nucleotides IAI46_03705 and IAI46_03710 are separated by 187 nucleotides IAI46_03710 and IAI46_03715 are separated by 9 nucleotides IAI46_03715 and IAI46_03720 are separated by 11 nucleotides
IAI46_03700: IAI46_03700 - aminopeptidase, at 807,491 to 808,567
_03700
IAI46_03705: IAI46_03705 - hypothetical protein, at 808,843 to 809,109
_03705
IAI46_03710: IAI46_03710 - uroporphyrinogen-III C-methyltransferase, at 809,297 to 810,727
_03710
IAI46_03715: IAI46_03715 - sulfate adenylyltransferase subunit CysD, at 810,737 to 811,645
_03715
IAI46_03720: IAI46_03720 - sulfate adenylyltransferase subunit CysN, at 811,657 to 813,084
_03720
Position (kb) 809
810
811 Strain fitness (log2 ratio) -2
-1
0
1
2 at 808.305 kb on + strand, within IAI46_03700 at 808.306 kb on - strand, within IAI46_03700 at 808.622 kb on + strand at 808.623 kb on - strand at 808.643 kb on - strand at 808.643 kb on - strand at 808.757 kb on + strand at 808.757 kb on + strand at 808.757 kb on + strand at 808.758 kb on - strand at 808.760 kb on + strand at 808.760 kb on + strand at 808.773 kb on - strand at 808.776 kb on + strand at 808.776 kb on + strand at 808.776 kb on + strand at 808.777 kb on - strand at 808.777 kb on - strand at 808.777 kb on - strand at 808.789 kb on - strand at 808.789 kb on - strand at 808.789 kb on - strand at 808.799 kb on - strand at 808.894 kb on + strand, within IAI46_03705 at 808.895 kb on - strand, within IAI46_03705 at 808.895 kb on - strand, within IAI46_03705 at 808.911 kb on + strand, within IAI46_03705 at 808.911 kb on + strand, within IAI46_03705 at 808.979 kb on + strand, within IAI46_03705 at 808.983 kb on + strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 808.984 kb on - strand, within IAI46_03705 at 809.018 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.025 kb on + strand, within IAI46_03705 at 809.059 kb on - strand, within IAI46_03705 at 809.141 kb on + strand at 809.141 kb on + strand at 809.142 kb on - strand at 809.167 kb on + strand at 809.167 kb on + strand at 809.199 kb on - strand at 809.207 kb on - strand at 809.214 kb on + strand at 809.215 kb on - strand at 809.215 kb on - strand at 809.215 kb on - strand at 809.258 kb on - strand at 809.258 kb on - strand at 809.259 kb on + strand at 809.260 kb on - strand at 809.260 kb on - strand at 809.268 kb on + strand at 809.268 kb on + strand at 809.268 kb on + strand at 809.280 kb on + strand at 809.281 kb on - strand at 809.281 kb on - strand at 809.281 kb on - strand at 809.282 kb on + strand at 809.282 kb on + strand at 809.282 kb on + strand at 809.283 kb on - strand at 809.283 kb on - strand at 809.283 kb on - strand at 809.303 kb on + strand at 809.303 kb on + strand at 809.303 kb on + strand at 809.304 kb on - strand at 809.304 kb on - strand at 809.304 kb on - strand at 809.307 kb on + strand at 809.307 kb on + strand at 809.307 kb on + strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.308 kb on - strand at 809.311 kb on + strand at 809.311 kb on + strand at 809.311 kb on + strand at 809.312 kb on - strand at 809.314 kb on - strand at 809.409 kb on + strand at 809.410 kb on - strand at 809.410 kb on - strand at 809.415 kb on + strand at 809.416 kb on - strand at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 809.707 kb on + strand, within IAI46_03710 at 810.045 kb on - strand, within IAI46_03710 at 810.370 kb on + strand, within IAI46_03710 at 810.370 kb on + strand, within IAI46_03710 at 810.371 kb on - strand, within IAI46_03710 at 810.449 kb on + strand, within IAI46_03710 at 810.449 kb on + strand, within IAI46_03710 at 810.449 kb on + strand, within IAI46_03710 at 810.449 kb on + strand, within IAI46_03710 at 810.450 kb on - strand, within IAI46_03710 at 810.450 kb on - strand, within IAI46_03710 at 810.450 kb on - strand, within IAI46_03710 at 810.450 kb on - strand, within IAI46_03710 at 810.492 kb on + strand, within IAI46_03710 at 810.643 kb on - strand at 810.725 kb on + strand at 810.726 kb on - strand at 810.737 kb on - strand at 810.784 kb on + strand at 810.784 kb on + strand at 810.784 kb on + strand at 810.785 kb on - strand at 810.785 kb on - strand at 810.790 kb on + strand at 810.790 kb on + strand at 810.790 kb on + strand at 810.791 kb on - strand at 810.791 kb on - strand at 810.791 kb on - strand at 810.791 kb on - strand at 810.791 kb on - strand at 810.836 kb on + strand, within IAI46_03715 at 810.837 kb on - strand, within IAI46_03715 at 810.837 kb on - strand, within IAI46_03715 at 810.881 kb on - strand, within IAI46_03715 at 811.066 kb on + strand, within IAI46_03715 at 811.066 kb on + strand, within IAI46_03715 at 811.112 kb on + strand, within IAI46_03715 at 811.177 kb on + strand, within IAI46_03715 at 811.177 kb on + strand, within IAI46_03715 at 811.178 kb on - strand, within IAI46_03715 at 811.178 kb on - strand, within IAI46_03715 at 811.181 kb on + strand, within IAI46_03715 at 811.181 kb on + strand, within IAI46_03715 at 811.247 kb on + strand, within IAI46_03715 at 811.247 kb on + strand, within IAI46_03715 at 811.248 kb on - strand, within IAI46_03715 at 811.316 kb on - strand, within IAI46_03715 at 811.361 kb on + strand, within IAI46_03715 at 811.362 kb on - strand, within IAI46_03715 at 811.362 kb on - strand, within IAI46_03715 at 811.386 kb on + strand, within IAI46_03715 at 811.387 kb on - strand, within IAI46_03715 at 811.426 kb on + strand, within IAI46_03715 at 811.638 kb on - strand at 811.708 kb on + strand at 811.708 kb on + strand at 811.709 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 808,305 + IAI46_03700 0.76 +0.1 808,306 - IAI46_03700 0.76 -0.1 808,622 + -0.2 808,623 - +0.5 808,643 - -1.4 808,643 - -0.6 808,757 + +0.8 808,757 + +0.1 808,757 + -0.5 808,758 - -1.1 808,760 + +0.0 808,760 + +0.9 808,773 - +0.0 808,776 + +0.6 808,776 + +0.5 808,776 + +0.0 808,777 - +0.3 808,777 - +0.2 808,777 - -0.7 808,789 - +0.4 808,789 - -1.0 808,789 - +0.2 808,799 - +0.6 808,894 + IAI46_03705 0.19 -0.3 808,895 - IAI46_03705 0.19 -0.4 808,895 - IAI46_03705 0.19 +2.1 808,911 + IAI46_03705 0.25 +0.6 808,911 + IAI46_03705 0.25 +1.4 808,979 + IAI46_03705 0.51 +0.1 808,983 + IAI46_03705 0.52 +0.5 808,984 - IAI46_03705 0.53 +0.7 808,984 - IAI46_03705 0.53 -0.2 808,984 - IAI46_03705 0.53 -0.5 808,984 - IAI46_03705 0.53 +0.1 808,984 - IAI46_03705 0.53 +0.5 809,018 + IAI46_03705 0.66 +2.1 809,025 + IAI46_03705 0.68 +1.1 809,025 + IAI46_03705 0.68 +0.5 809,025 + IAI46_03705 0.68 +0.1 809,059 - IAI46_03705 0.81 -0.3 809,141 + +0.1 809,141 + -0.8 809,142 - -0.6 809,167 + +0.0 809,167 + -0.5 809,199 - +0.3 809,207 - -0.5 809,214 + +1.1 809,215 - -0.8 809,215 - +0.6 809,215 - +0.5 809,258 - +0.1 809,258 - -0.5 809,259 + -0.2 809,260 - +0.2 809,260 - +0.1 809,268 + +0.8 809,268 + +0.4 809,268 + -0.8 809,280 + +0.4 809,281 - +0.1 809,281 - -0.2 809,281 - -1.0 809,282 + +0.1 809,282 + -0.2 809,282 + -0.2 809,283 - +0.2 809,283 - -0.4 809,283 - +1.1 809,303 + +1.4 809,303 + +1.0 809,303 + -0.3 809,304 - -0.1 809,304 - -0.1 809,304 - +0.2 809,307 + -0.4 809,307 + +1.0 809,307 + +0.3 809,308 - +1.9 809,308 - +0.1 809,308 - -1.6 809,308 - +1.0 809,311 + +0.4 809,311 + +0.5 809,311 + -0.2 809,312 - -0.0 809,314 - -0.1 809,409 + +0.4 809,410 - -0.8 809,410 - +1.6 809,415 + -1.2 809,416 - -1.6 809,707 + IAI46_03710 0.29 -1.0 809,707 + IAI46_03710 0.29 +0.4 809,707 + IAI46_03710 0.29 -0.1 809,707 + IAI46_03710 0.29 +0.3 809,707 + IAI46_03710 0.29 -1.1 810,045 - IAI46_03710 0.52 +0.5 810,370 + IAI46_03710 0.75 +0.3 810,370 + IAI46_03710 0.75 +0.2 810,371 - IAI46_03710 0.75 -0.5 810,449 + IAI46_03710 0.81 +0.1 810,449 + IAI46_03710 0.81 -0.0 810,449 + IAI46_03710 0.81 +0.3 810,449 + IAI46_03710 0.81 +0.5 810,450 - IAI46_03710 0.81 +0.0 810,450 - IAI46_03710 0.81 +0.5 810,450 - IAI46_03710 0.81 +0.5 810,450 - IAI46_03710 0.81 -0.1 810,492 + IAI46_03710 0.84 -0.5 810,643 - -0.2 810,725 + +0.2 810,726 - +0.1 810,737 - -0.4 810,784 + -0.3 810,784 + -0.9 810,784 + +0.7 810,785 - -0.5 810,785 - +1.1 810,790 + -0.1 810,790 + -0.5 810,790 + -1.8 810,791 - +2.3 810,791 - +1.0 810,791 - +0.4 810,791 - -0.2 810,791 - +0.2 810,836 + IAI46_03715 0.11 -0.8 810,837 - IAI46_03715 0.11 -0.2 810,837 - IAI46_03715 0.11 +0.7 810,881 - IAI46_03715 0.16 +0.7 811,066 + IAI46_03715 0.36 -2.2 811,066 + IAI46_03715 0.36 +1.2 811,112 + IAI46_03715 0.41 +0.1 811,177 + IAI46_03715 0.48 -0.6 811,177 + IAI46_03715 0.48 +1.0 811,178 - IAI46_03715 0.49 -0.1 811,178 - IAI46_03715 0.49 +0.0 811,181 + IAI46_03715 0.49 -0.6 811,181 + IAI46_03715 0.49 -0.6 811,247 + IAI46_03715 0.56 +0.4 811,247 + IAI46_03715 0.56 +1.8 811,248 - IAI46_03715 0.56 -0.4 811,316 - IAI46_03715 0.64 -0.7 811,361 + IAI46_03715 0.69 +0.0 811,362 - IAI46_03715 0.69 -0.5 811,362 - IAI46_03715 0.69 -1.1 811,386 + IAI46_03715 0.71 +0.7 811,387 - IAI46_03715 0.72 +0.1 811,426 + IAI46_03715 0.76 -0.5 811,638 - +0.4 811,708 + +0.3 811,708 + -0.4 811,709 - +0.3
Or see this region's nucleotide sequence