Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03610 and IAI46_03615 are separated by 81 nucleotides IAI46_03615 and IAI46_03620 are separated by 297 nucleotides
IAI46_03610: IAI46_03610 - CTP synthase (glutamine hydrolyzing), at 784,289 to 785,926
_03610
IAI46_03615: IAI46_03615 - phosphopyruvate hydratase, at 786,008 to 787,303
_03615
IAI46_03620: IAI46_03620 - NAD(P)/FAD-dependent oxidoreductase, at 787,601 to 788,791
_03620
Position (kb) 786
787
788 Strain fitness (log2 ratio) -2
-1
0
1 at 785.924 kb on + strand at 785.924 kb on + strand at 785.980 kb on + strand at 785.980 kb on + strand at 785.985 kb on + strand at 787.291 kb on + strand at 787.301 kb on + strand at 787.323 kb on + strand at 787.324 kb on - strand at 787.370 kb on + strand at 787.504 kb on + strand at 787.504 kb on + strand at 787.529 kb on + strand at 787.538 kb on - strand at 787.647 kb on + strand at 787.648 kb on - strand at 787.686 kb on + strand at 787.696 kb on + strand at 787.739 kb on + strand, within IAI46_03620 at 787.754 kb on - strand, within IAI46_03620 at 787.758 kb on - strand, within IAI46_03620 at 787.758 kb on - strand, within IAI46_03620 at 787.758 kb on - strand, within IAI46_03620 at 787.834 kb on + strand, within IAI46_03620 at 787.864 kb on - strand, within IAI46_03620 at 787.907 kb on + strand, within IAI46_03620 at 787.908 kb on - strand, within IAI46_03620 at 787.989 kb on - strand, within IAI46_03620 at 787.994 kb on + strand, within IAI46_03620 at 787.994 kb on + strand, within IAI46_03620 at 788.138 kb on + strand, within IAI46_03620 at 788.180 kb on + strand, within IAI46_03620 at 788.181 kb on - strand, within IAI46_03620 at 788.182 kb on + strand, within IAI46_03620 at 788.182 kb on + strand, within IAI46_03620 at 788.182 kb on + strand, within IAI46_03620 at 788.182 kb on + strand, within IAI46_03620 at 788.183 kb on - strand, within IAI46_03620 at 788.183 kb on - strand, within IAI46_03620 at 788.183 kb on - strand, within IAI46_03620 at 788.183 kb on - strand, within IAI46_03620 at 788.183 kb on - strand, within IAI46_03620 at 788.186 kb on + strand, within IAI46_03620 at 788.186 kb on + strand, within IAI46_03620 at 788.296 kb on + strand, within IAI46_03620
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 785,924 + +0.1 785,924 + +0.1 785,980 + +0.6 785,980 + -0.3 785,985 + -0.1 787,291 + -0.6 787,301 + -0.0 787,323 + +0.4 787,324 - +0.2 787,370 + +0.1 787,504 + +0.8 787,504 + -0.6 787,529 + +0.8 787,538 - +0.8 787,647 + +0.1 787,648 - +0.1 787,686 + +0.6 787,696 + +0.5 787,739 + IAI46_03620 0.12 -1.1 787,754 - IAI46_03620 0.13 -0.1 787,758 - IAI46_03620 0.13 -0.4 787,758 - IAI46_03620 0.13 +1.3 787,758 - IAI46_03620 0.13 -0.9 787,834 + IAI46_03620 0.20 +0.1 787,864 - IAI46_03620 0.22 +0.6 787,907 + IAI46_03620 0.26 -0.4 787,908 - IAI46_03620 0.26 +0.1 787,989 - IAI46_03620 0.33 +0.1 787,994 + IAI46_03620 0.33 -0.3 787,994 + IAI46_03620 0.33 +0.2 788,138 + IAI46_03620 0.45 +0.3 788,180 + IAI46_03620 0.49 +0.8 788,181 - IAI46_03620 0.49 -1.8 788,182 + IAI46_03620 0.49 +0.8 788,182 + IAI46_03620 0.49 -0.5 788,182 + IAI46_03620 0.49 -0.3 788,182 + IAI46_03620 0.49 +0.3 788,183 - IAI46_03620 0.49 +0.3 788,183 - IAI46_03620 0.49 +0.4 788,183 - IAI46_03620 0.49 +0.3 788,183 - IAI46_03620 0.49 -0.3 788,183 - IAI46_03620 0.49 -0.6 788,186 + IAI46_03620 0.49 +0.4 788,186 + IAI46_03620 0.49 +0.6 788,296 + IAI46_03620 0.58 +0.1
Or see this region's nucleotide sequence