Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4229

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
5,070,600	+		Echvi_4228	0.78	+0.8
5,070,601	-		Echvi_4228	0.78	+1.2
5,070,647	+		Echvi_4228	0.80	-1.3
5,070,647	+		Echvi_4228	0.80	+0.0
5,070,784	+		Echvi_4228	0.84	+1.3
5,070,859	+		Echvi_4228	0.87	-0.4
5,070,891	-		Echvi_4228	0.88	+0.6
5,070,891	-		Echvi_4228	0.88	-0.1
5,070,959	-		Echvi_4228	0.90	+0.2
5,070,966	+				-0.6
5,070,967	-				-1.6
5,071,131	-				+0.1
5,071,216	+				-0.9
5,071,217	-				-0.2
5,071,268	+				-0.9
5,071,268	+				+0.1
5,071,269	-				-1.0
5,071,298	-				-0.5
5,071,311	+				-0.7
5,071,311	+				+1.1
5,071,312	-				-0.2
5,071,316	-				-0.4
5,071,366	+				+1.3
5,071,376	+				+1.0
5,071,393	+				+0.4
5,071,439	+				+1.0
5,071,459	+				-0.9
5,071,464	+				-0.4
5,071,469	+				-0.6
5,071,470	-				-0.1
5,071,470	-				-0.9
5,071,470	-				-0.3
5,071,522	+				+0.8
5,071,523	-				-1.0
5,071,528	+				-0.0
5,071,529	-				-0.4
5,071,594	+				+0.6
5,071,594	+				-0.7
5,071,649	+				+1.4
5,071,649	+				+1.5
5,071,698	+		Echvi_4229	0.11	+0.5
5,071,748	+		Echvi_4229	0.15	+1.7
5,071,749	-		Echvi_4229	0.15	+0.2
5,071,765	+		Echvi_4229	0.16	+2.0
5,071,859	+		Echvi_4229	0.24	-1.5
5,071,860	-		Echvi_4229	0.24	+0.7
5,072,078	+		Echvi_4229	0.43	+0.9
5,072,102	+		Echvi_4229	0.45	+0.5
5,072,103	-		Echvi_4229	0.45	+1.0
5,072,249	+		Echvi_4229	0.57	-0.9
5,072,264	-		Echvi_4229	0.58	+1.4
5,072,347	+		Echvi_4229	0.65	+0.4
5,072,348	-		Echvi_4229	0.65	+1.0
5,072,370	+		Echvi_4229	0.67	+0.6
5,072,436	-		Echvi_4229	0.73	+1.5
5,072,474	+		Echvi_4229	0.76	-1.1
5,072,720	+				-0.0
5,072,725	-				+1.1
5,072,755	-				+0.7
5,072,768	+				-0.3
5,072,787	+				+0.6
5,072,800	-				-0.2
5,072,800	-				-0.1
5,072,825	+				+0.5
5,072,825	+				+1.2
5,072,865	-				-0.7
5,072,865	-				-1.2
5,072,865	-				-0.0
5,072,870	+				-0.9
5,072,871	-				-2.6
5,072,946	-				-0.6
5,072,946	-				-0.3
5,072,946	-				+0.2
5,072,979	+				+0.9
5,072,980	-				-0.6
5,072,987	+				+1.1
5,072,987	+				+1.0
5,072,987	+				-0.4
5,072,988	-				+1.0
5,072,988	-				+0.7
5,072,988	-				+1.6
5,073,011	+				+1.0
5,073,157	+		Echvi_4230	0.11	-0.0
5,073,233	-		Echvi_4230	0.16	+2.4
5,073,275	-		Echvi_4230	0.19	+0.3
5,073,366	+		Echvi_4230	0.24	+0.7
5,073,366	+		Echvi_4230	0.24	-1.4
5,073,366	+				+1.0
5,073,367	-		Echvi_4230	0.25	+1.3
5,073,385	+		Echvi_4230	0.26	-0.2
5,073,385	+		Echvi_4230	0.26	-0.3
5,073,386	-		Echvi_4230	0.26	-0.8
5,073,386	-		Echvi_4230	0.26	+0.2
5,073,386	-		Echvi_4230	0.26	+0.8
5,073,386	-		Echvi_4230	0.26	+2.4
5,073,388	-		Echvi_4230	0.26	+0.8
5,073,388	-		Echvi_4230	0.26	+2.3
5,073,554	-		Echvi_4230	0.37	+0.8
5,073,554	-		Echvi_4230	0.37	+1.3
5,073,566	-		Echvi_4230	0.38	+0.1
5,073,566	-		Echvi_4230	0.38	-0.1
5,073,579	-		Echvi_4230	0.38	-0.2
5,073,690	+		Echvi_4230	0.46	-0.0
5,073,690	+		Echvi_4230	0.46	+0.9
5,073,690	+		Echvi_4230	0.46	-0.7
5,073,691	-		Echvi_4230	0.46	-0.1
5,073,691	-		Echvi_4230	0.46	+0.1
5,073,691	-		Echvi_4230	0.46	+0.5