Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3828

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
4,574,166	-				-1.3
4,574,166	-				+0.8
4,574,228	+		Echvi_3827	0.14	-0.5
4,574,241	-		Echvi_3827	0.15	+0.6
4,574,256	+		Echvi_3827	0.16	-0.1
4,574,280	+		Echvi_3827	0.19	+0.0
4,574,281	-		Echvi_3827	0.19	+0.7
4,574,350	+		Echvi_3827	0.25	-0.3
4,574,424	+		Echvi_3827	0.32	+0.7
4,574,424	+		Echvi_3827	0.32	-0.2
4,574,450	-		Echvi_3827	0.34	-1.2
4,574,499	+		Echvi_3827	0.39	-0.3
4,574,499	+		Echvi_3827	0.39	-1.5
4,574,508	-		Echvi_3827	0.40	+0.8
4,574,587	+		Echvi_3827	0.47	-0.6
4,574,588	-		Echvi_3827	0.47	-0.1
4,574,588	-		Echvi_3827	0.47	-1.0
4,574,642	-		Echvi_3827	0.52	+1.5
4,574,677	-		Echvi_3827	0.55	-0.0
4,574,710	+		Echvi_3827	0.58	+0.9
4,574,711	-		Echvi_3827	0.59	-0.8
4,574,767	-		Echvi_3827	0.64	-0.6
4,574,767	-		Echvi_3827	0.64	+0.5
4,574,795	+		Echvi_3827	0.66	+0.1
4,574,899	-		Echvi_3827	0.76	-1.2
4,574,899	-		Echvi_3827	0.76	-0.9
4,574,985	+		Echvi_3827	0.84	-1.1
4,575,048	+		Echvi_3827	0.90	+1.5
4,575,068	+				-0.1
4,575,069	-				+0.4
4,575,073	+				+0.5
4,575,073	+				+0.6
4,575,079	-				-0.2
4,575,161	-				+0.6
4,575,167	+				-0.9
4,575,299	-		Echvi_3828	0.20	+2.2
4,575,412	-		Echvi_3828	0.35	+0.1
4,575,414	-		Echvi_3828	0.36	+0.7
4,575,436	-		Echvi_3828	0.39	-1.5
4,575,436	-		Echvi_3828	0.39	+0.1
4,575,438	-		Echvi_3828	0.39	+0.5
4,575,442	+		Echvi_3828	0.39	-1.4
4,575,442	+		Echvi_3828	0.39	-0.6
4,575,443	-		Echvi_3828	0.40	-2.1
4,575,478	-		Echvi_3828	0.44	+1.2
4,575,511	-		Echvi_3828	0.49	-0.2
4,575,569	+		Echvi_3828	0.57	+0.7
4,575,569	+		Echvi_3828	0.57	-0.3
4,575,569	+		Echvi_3828	0.57	-0.2
4,575,570	-		Echvi_3828	0.57	+0.6
4,575,588	+		Echvi_3828	0.59	-0.3
4,575,625	-		Echvi_3828	0.64	+0.4
4,575,636	+		Echvi_3828	0.66	+0.4
4,575,638	+		Echvi_3828	0.66	-0.4
4,575,638	+		Echvi_3828	0.66	+0.3
4,575,639	-		Echvi_3828	0.66	-0.5
4,575,649	+		Echvi_3828	0.68	-0.1
4,575,649	+		Echvi_3828	0.68	-0.7
4,575,650	-		Echvi_3828	0.68	+0.9
4,575,686	-		Echvi_3828	0.73	+1.8
4,575,743	+		Echvi_3828	0.81	+0.3
4,575,756	+		Echvi_3828	0.82	+0.9
4,575,756	+		Echvi_3828	0.82	+0.1
4,575,756	+		Echvi_3828	0.82	+1.2
4,575,756	+		Echvi_3828	0.82	+1.0
4,575,756	+		Echvi_3828	0.82	-1.0
4,575,756	+		Echvi_3828	0.82	+0.1
4,575,757	-		Echvi_3828	0.83	-0.1
4,575,757	-		Echvi_3828	0.83	+0.8
4,575,758	+		Echvi_3828	0.83	+1.3
4,575,758	+		Echvi_3828	0.83	-1.0
4,575,759	-		Echvi_3828	0.83	+0.1
4,575,759	-		Echvi_3828	0.83	+0.6
4,575,759	-		Echvi_3828	0.83	-0.0
4,575,830	-				-0.1
4,575,830	-				+0.9
4,575,830	-				-0.5
4,575,840	+				+2.1
4,575,840	+				+0.3
4,575,893	+				-0.2
4,575,894	-				-2.2
4,575,959	-				-0.1
4,576,008	+				+0.1
4,576,008	+				+0.0
4,576,008	+				-1.9
4,576,197	+		Echvi_3829	0.36	-0.4
4,576,197	+		Echvi_3829	0.36	-0.7
4,576,259	+		Echvi_3829	0.49	-0.1
4,576,260	-		Echvi_3829	0.49	+0.4
4,576,260	-		Echvi_3829	0.49	+0.3
4,576,260	-		Echvi_3829	0.49	-1.8
4,576,302	-		Echvi_3829	0.58	+0.1
4,576,329	-		Echvi_3829	0.64	-0.2
4,576,453	-		Echvi_3829	0.90	+0.3
4,576,459	-				-1.1
4,576,549	-				-0.7
4,576,549	-				-1.4
4,576,563	-				-0.5
4,576,605	-				-1.0
4,576,624	+				-3.1
4,576,628	+				-0.5
4,576,628	+				+0.6
4,576,628	+				+0.1
4,576,629	-				+0.3
4,576,629	-				-0.9
4,576,629	-				+1.0
4,576,732	-		Echvi_3830	0.13	+0.8
4,576,844	-		Echvi_3830	0.21	+0.4