Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3705

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
4,410,805	+				-0.7
4,410,815	-				-3.0
4,410,848	+				-0.6
4,410,848	+				-2.5
4,410,922	+		Echvi_3704	0.14	-3.7
4,410,923	-		Echvi_3704	0.14	-1.4
4,410,928	-		Echvi_3704	0.15	-1.6
4,410,946	+		Echvi_3704	0.18	+0.2
4,410,946	+		Echvi_3704	0.18	-0.1
4,410,947	-		Echvi_3704	0.18	-2.7
4,410,947	-		Echvi_3704	0.18	-3.0
4,410,947	-		Echvi_3704	0.18	-2.7
4,410,947	-		Echvi_3704	0.18	-2.8
4,410,947	-		Echvi_3704	0.18	-1.3
4,410,947	-		Echvi_3704	0.18	-2.0
4,411,377	+		Echvi_3704	0.82	-0.7
4,411,377	+		Echvi_3704	0.82	-2.1
4,411,377	+		Echvi_3704	0.82	-3.7
4,411,378	-		Echvi_3704	0.82	-3.4
4,411,435	+				-2.7
4,411,436	-				-0.9
4,411,436	-				-3.1
4,411,437	+				-1.9
4,411,438	-				-2.1
4,411,495	+				+0.0
4,411,495	+				-0.1
4,411,500	+				-0.0
4,411,501	-				+0.1
4,411,501	-				+2.0
4,411,501	-				-0.5
4,411,534	+				+0.5
4,411,534	+				+1.6
4,411,534	+				+0.6
4,411,534	+				+2.1
4,411,536	+				+0.9
4,411,536	+				+0.1
4,411,537	-				+2.6
4,411,538	+				+0.3
4,411,538	+				-0.5
4,411,539	-				-0.9
4,411,539	-				+0.4
4,411,539	-				-0.2
4,411,539	-				-0.0
4,411,570	-				-1.1
4,411,572	+				-1.4
4,411,573	-				+0.2
4,411,573	-				+1.8
4,411,573	-				+0.4
4,411,585	+				+0.3
4,411,596	+				-0.1
4,411,597	-				-0.3
4,411,597	-				+1.3
4,411,613	+				+0.2
4,411,613	+				+0.1
4,411,640	+				-1.1
4,411,723	+				+0.7
4,411,726	-				-0.2
4,411,790	+				-0.3
4,411,922	+		Echvi_3705	0.18	+0.7
4,411,923	-		Echvi_3705	0.18	-0.3
4,411,923	-		Echvi_3705	0.18	+0.4
4,411,923	-		Echvi_3705	0.18	-0.6
4,412,080	+		Echvi_3705	0.31	-0.9
4,412,080	+		Echvi_3705	0.31	+0.4
4,412,081	-		Echvi_3705	0.31	-1.1
4,412,081	-		Echvi_3705	0.31	-0.7
4,412,081	-		Echvi_3705	0.31	-0.8
4,412,168	-		Echvi_3705	0.39	+0.2
4,412,168	-		Echvi_3705	0.39	-0.7
4,412,257	+		Echvi_3705	0.46	-0.0
4,412,427	+		Echvi_3705	0.61	+0.2
4,412,611	-		Echvi_3705	0.76	+0.3
4,412,622	+		Echvi_3705	0.77	-0.8
4,412,622	+		Echvi_3705	0.77	-0.3
4,412,622	+		Echvi_3705	0.77	-0.1
4,412,622	+		Echvi_3705	0.77	+1.0
4,412,622	+		Echvi_3705	0.77	-0.6
4,412,623	-		Echvi_3705	0.77	-0.9
4,412,624	+		Echvi_3705	0.77	-1.3
4,412,624	+		Echvi_3705	0.77	+0.2
4,412,624	+		Echvi_3705	0.77	-1.4
4,412,624	+		Echvi_3705	0.77	-0.6
4,412,624	+		Echvi_3705	0.77	-0.6
4,412,625	-		Echvi_3705	0.77	+0.4
4,412,644	+		Echvi_3705	0.79	-1.9
4,412,644	+		Echvi_3705	0.79	-0.1
4,412,645	-		Echvi_3705	0.79	+0.1
4,412,645	-		Echvi_3705	0.79	+0.3
4,412,721	-		Echvi_3705	0.85	+1.5
4,412,760	-		Echvi_3705	0.89	-0.0
4,412,792	+				+0.2
4,412,792	+				+0.0
4,412,793	-				-1.0
4,412,793	-				-0.4
4,412,793	-				+0.6
4,412,916	+				+0.4
4,412,917	-				+0.4
4,412,930	-				-0.0
4,412,976	+				+1.5
4,412,976	+				+0.9
4,412,977	-				+1.3
4,412,978	+				-0.2
4,412,978	+				-0.6
4,412,979	-				+0.0
4,413,035	-				-0.4
4,413,042	+				+0.2
4,413,043	-				-0.0
4,413,043	-				+0.1
4,413,046	-				-0.3
4,413,068	-				+0.5
4,413,112	-		Echvi_3706	0.11	-1.3
4,413,123	+		Echvi_3706	0.12	-2.5
4,413,123	+		Echvi_3706	0.12	+1.1
4,413,123	+		Echvi_3706	0.12	+1.6
4,413,124	-		Echvi_3706	0.12	+0.9
4,413,193	-		Echvi_3706	0.18	-0.7
4,413,193	-		Echvi_3706	0.18	-0.3
4,413,231	+		Echvi_3706	0.20	-1.1
4,413,339	+		Echvi_3706	0.29	-1.2
4,413,411	+		Echvi_3706	0.34	+0.1
4,413,414	+		Echvi_3706	0.34	+0.9
4,413,415	-		Echvi_3706	0.35	-0.3
4,413,415	-		Echvi_3706	0.35	+0.7
4,413,415	-		Echvi_3706	0.35	+0.4
4,413,415	-		Echvi_3706	0.35	-1.7
4,413,519	+		Echvi_3706	0.43	+0.9
4,413,555	+		Echvi_3706	0.45	+0.0
4,413,588	+		Echvi_3706	0.48	-0.0
4,413,588	+		Echvi_3706	0.48	+0.3
4,413,621	-		Echvi_3706	0.50	+1.2
4,413,627	+		Echvi_3706	0.51	+0.8
4,413,646	+		Echvi_3706	0.52	+1.3
4,413,663	+		Echvi_3706	0.54	+0.4
4,413,703	-		Echvi_3706	0.57	+0.6
4,413,771	+		Echvi_3706	0.62	+0.4
4,413,808	-		Echvi_3706	0.65	+0.5
4,413,843	+		Echvi_3706	0.67	+0.0
4,413,844	-		Echvi_3706	0.67	+0.4