Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3680

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
4,383,509	+				-1.5
4,383,509	+				-1.2
4,383,520	+				-0.2
4,383,520	+				-0.1
4,383,520	+				-0.7
4,383,520	+				+0.5
4,383,521	-				+0.6
4,383,529	+				-0.6
4,383,529	+				+0.3
4,383,530	-				-0.6
4,383,530	-				+0.4
4,383,530	-				+1.1
4,383,575	+				+2.2
4,383,617	+				-0.2
4,383,618	-				-0.6
4,383,695	+		Echvi_3679	0.18	-0.4
4,383,698	+		Echvi_3679	0.19	-1.1
4,383,698	+		Echvi_3679	0.19	-1.2
4,383,698	+		Echvi_3679	0.19	+0.3
4,383,699	-		Echvi_3679	0.19	+1.1
4,383,699	-		Echvi_3679	0.19	+0.6
4,383,700	+		Echvi_3679	0.19	+0.7
4,383,700	+		Echvi_3679	0.19	-0.5
4,383,701	-		Echvi_3679	0.19	+0.5
4,383,786	-		Echvi_3679	0.34	-0.1
4,383,786	-		Echvi_3679	0.34	-1.3
4,383,796	+		Echvi_3679	0.36	+0.2
4,383,796	+		Echvi_3679	0.36	-0.1
4,383,797	-		Echvi_3679	0.36	-0.6
4,383,838	+		Echvi_3679	0.44	-0.7
4,383,838	+		Echvi_3679	0.44	-0.4
4,383,898	+		Echvi_3679	0.54	+0.1
4,383,898	+		Echvi_3679	0.54	+0.0
4,383,898	+		Echvi_3679	0.54	-0.5
4,383,899	-		Echvi_3679	0.54	-0.3
4,383,899	-		Echvi_3679	0.54	-0.0
4,383,899	-		Echvi_3679	0.54	-0.3
4,383,899	-		Echvi_3679	0.54	+0.2
4,383,903	-		Echvi_3679	0.55	+0.5
4,383,903	-		Echvi_3679	0.55	-1.6
4,383,904	+		Echvi_3679	0.55	+0.7
4,383,905	-		Echvi_3679	0.55	-0.8
4,384,041	+		Echvi_3679	0.79	+0.5
4,384,042	-		Echvi_3679	0.79	+0.1
4,384,148	+				+0.2
4,384,148	+				+0.2
4,384,148	+				+0.6
4,384,157	+				+1.1
4,384,158	-				-0.7
4,384,160	+				+0.1
4,384,160	+				-1.1
4,384,160	+				+0.4
4,384,214	-				-0.4
4,384,214	-				-0.8
4,384,214	-				+0.0
4,384,327	-				+0.9
4,384,346	-				+0.9
4,384,346	-				-2.4
4,384,403	-				+1.7
4,384,435	+				-1.1
4,384,495	-		Echvi_3680	0.17	-0.1
4,384,648	-		Echvi_3680	0.64	+1.6
4,384,648	-		Echvi_3680	0.64	+1.2
4,384,648	-		Echvi_3680	0.64	+0.4
4,384,648	-		Echvi_3680	0.64	+0.5
4,384,648	-		Echvi_3680	0.64	-0.5
4,384,734	+				-0.2
4,384,734	+				+0.4
4,384,734	+				-0.8
4,384,735	-				-0.3
4,384,735	-				-1.6
4,384,735	-				+1.1
4,384,735	-				-2.7
4,384,738	-				-2.2
4,384,822	-		Echvi_3681	0.12	+0.5
4,384,867	-		Echvi_3681	0.21	+1.1
4,385,035	+		Echvi_3681	0.54	-1.7
4,385,035	+		Echvi_3681	0.54	-0.0
4,385,036	-		Echvi_3681	0.54	-0.0
4,385,038	-		Echvi_3681	0.55	-1.0
4,385,038	-		Echvi_3681	0.55	+0.2
4,385,158	+		Echvi_3681	0.79	+0.0
4,385,159	-		Echvi_3681	0.79	-0.6
4,385,311	+				-0.2
4,385,404	+		Echvi_3682	0.14	+0.4
4,385,444	+		Echvi_3682	0.22	-1.0
4,385,445	-		Echvi_3682	0.22	-0.7
4,385,468	+		Echvi_3682	0.27	-0.1
4,385,468	+		Echvi_3682	0.27	+0.7
4,385,469	-		Echvi_3682	0.27	-0.8
4,385,501	+		Echvi_3682	0.34	+0.1
4,385,502	-		Echvi_3682	0.34	+0.7
4,385,630	+		Echvi_3682	0.61	-0.2
4,385,657	-		Echvi_3682	0.66	-1.0
4,385,695	+		Echvi_3682	0.74	+1.5
4,385,755	+		Echvi_3682	0.87	+0.4
4,385,762	-		Echvi_3682	0.88	-0.3