Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3673

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
4,377,399	+		Echvi_3671	0.74	-2.6
4,377,568	+				+1.7
4,377,734	+				-0.9
4,377,734	+				-0.5
4,377,806	-		Echvi_3672	0.24	+1.0
4,377,809	+		Echvi_3672	0.25	+0.3
4,377,810	-		Echvi_3672	0.25	+0.3
4,377,822	+		Echvi_3672	0.27	+0.5
4,377,822	+		Echvi_3672	0.27	-1.9
4,377,823	-		Echvi_3672	0.27	+0.4
4,377,893	-		Echvi_3672	0.42	+0.4
4,377,971	+		Echvi_3672	0.57	-1.8
4,377,974	+		Echvi_3672	0.58	+0.8
4,377,975	-		Echvi_3672	0.58	-0.4
4,378,016	+		Echvi_3672	0.66	+0.5
4,378,017	-		Echvi_3672	0.67	-1.4
4,378,017	-		Echvi_3672	0.67	+0.6
4,378,017	-		Echvi_3672	0.67	-0.9
4,378,017	-		Echvi_3672	0.67	-0.0
4,378,037	+		Echvi_3672	0.71	-0.6
4,378,210	-				+1.0
4,378,210	-				+0.8
4,378,259	+				-0.4
4,378,260	-				-1.2
4,378,310	-				+0.3
4,378,312	-				+0.5
4,378,312	-				+0.7
4,378,314	-				+1.7
4,378,323	+				+0.7
4,378,415	-				+0.8
4,378,462	+		Echvi_3673	0.14	+0.6
4,378,473	+		Echvi_3673	0.15	+1.2
4,378,473	+		Echvi_3673	0.15	-2.8
4,378,486	-		Echvi_3673	0.17	-0.6
4,378,508	-		Echvi_3673	0.20	-1.2
4,378,513	-		Echvi_3673	0.20	+1.0
4,378,513	-		Echvi_3673	0.20	+0.3
4,378,569	+		Echvi_3673	0.27	-0.2
4,378,653	-		Echvi_3673	0.37	-0.1
4,378,653	-		Echvi_3673	0.37	-0.3
4,378,655	-		Echvi_3673	0.37	-0.0
4,378,655	-		Echvi_3673	0.37	+1.2
4,378,672	+		Echvi_3673	0.39	+2.4
4,378,672	+		Echvi_3673	0.39	+0.1
4,378,676	+		Echvi_3673	0.40	+0.3
4,378,676	+		Echvi_3673	0.40	-0.6
4,378,676	+		Echvi_3673	0.40	+0.3
4,378,676	+		Echvi_3673	0.40	-0.4
4,378,677	-		Echvi_3673	0.40	-0.2
4,378,677	-		Echvi_3673	0.40	+1.1
4,378,677	-		Echvi_3673	0.40	-0.0
4,378,677	-		Echvi_3673	0.40	+0.4
4,378,731	+		Echvi_3673	0.46	+1.2
4,378,732	-		Echvi_3673	0.46	-0.1
4,378,738	+		Echvi_3673	0.47	-0.3
4,378,757	+		Echvi_3673	0.49	-0.6
4,378,757	+		Echvi_3673	0.49	+2.0
4,378,837	+		Echvi_3673	0.59	+0.1
4,378,840	-		Echvi_3673	0.59	-1.2
4,378,869	-		Echvi_3673	0.62	-0.4
4,378,873	+		Echvi_3673	0.63	+0.2
4,378,911	-		Echvi_3673	0.67	-0.5
4,378,911	-		Echvi_3673	0.67	-0.2
4,378,914	-		Echvi_3673	0.68	+0.4
4,378,918	+		Echvi_3673	0.68	-0.5
4,378,919	-		Echvi_3673	0.68	-0.0
4,378,935	+		Echvi_3673	0.70	-0.2
4,378,935	+		Echvi_3673	0.70	+1.5
4,378,962	+		Echvi_3673	0.73	-0.4
4,378,962	+		Echvi_3673	0.73	+0.2
4,378,963	-		Echvi_3673	0.74	-0.5
4,379,051	-		Echvi_3673	0.84	-0.5
4,379,054	-		Echvi_3673	0.84	+0.7
4,379,113	-				-0.5
4,379,201	+				+0.5
4,379,201	+				-0.6
4,379,224	+				+0.2
4,379,224	+				-0.1
4,379,224	+				-0.8
4,379,224	+				-0.3
4,379,226	+				-0.5
4,379,226	+				-0.7
4,379,227	-				+0.2
4,379,231	+				-2.0
4,379,272	+				+0.6
4,379,272	+				-0.4
4,379,388	-				+0.5
4,379,419	+				-0.8
4,379,420	-				-0.7
4,379,446	+				+0.1
4,379,447	-				+0.3
4,379,487	-		Echvi_3674	0.15	+0.2
4,379,543	+		Echvi_3674	0.36	-0.8
4,379,544	-		Echvi_3674	0.36	-0.6
4,379,580	+		Echvi_3674	0.49	+0.8
4,379,581	-		Echvi_3674	0.49	+0.9
4,379,603	-		Echvi_3674	0.57	+0.1
4,379,660	+		Echvi_3674	0.78	-0.5
4,379,728	+				+0.6
4,379,729	-				+0.8
4,379,729	-				-0.1
4,379,744	+				+0.3
4,379,749	-				+0.1
4,379,757	+				-0.6
4,379,758	-				-0.2
4,379,762	-				+0.5
4,379,789	+				-0.0
4,379,816	+				+0.2
4,379,817	-				-0.1
4,379,825	+				-1.8
4,379,825	+				-2.5
4,379,847	-				-0.5
4,379,847	-				+0.1
4,379,891	+		Echvi_3675	0.10	-0.9
4,379,921	+		Echvi_3675	0.13	+1.3
4,379,921	+		Echvi_3675	0.13	+0.2
4,379,921	+		Echvi_3675	0.13	+0.5
4,379,996	-		Echvi_3675	0.20	+0.8
4,380,069	+		Echvi_3675	0.28	-0.1
4,380,070	-		Echvi_3675	0.28	-1.0
4,380,070	-		Echvi_3675	0.28	+0.2
4,380,077	+		Echvi_3675	0.28	+0.3
4,380,078	-		Echvi_3675	0.28	-0.6
4,380,078	-		Echvi_3675	0.28	+0.7
4,380,078	-		Echvi_3675	0.28	-1.4
4,380,078	-		Echvi_3675	0.28	-0.1
4,380,079	+		Echvi_3675	0.28	+1.2
4,380,080	-		Echvi_3675	0.29	-1.4
4,380,080	-		Echvi_3675	0.29	+0.7
4,380,080	-		Echvi_3675	0.29	-0.0
4,380,080	-		Echvi_3675	0.29	+0.3
4,380,081	+		Echvi_3675	0.29	+1.2
4,380,082	-		Echvi_3675	0.29	-1.3
4,380,082	-		Echvi_3675	0.29	+0.0
4,380,097	-		Echvi_3675	0.30	-0.0
4,380,148	+		Echvi_3675	0.35	-2.0
4,380,148	+		Echvi_3675	0.35	+0.8
4,380,149	-		Echvi_3675	0.35	+0.2
4,380,149	-		Echvi_3675	0.35	-1.0
4,380,163	-		Echvi_3675	0.37	-2.1
4,380,168	+		Echvi_3675	0.37	-0.3
4,380,168	+		Echvi_3675	0.37	-1.9