Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3505

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
4,155,196	-		Echvi_3504	0.19	+0.4
4,155,204	+		Echvi_3504	0.19	+0.0
4,155,205	-		Echvi_3504	0.20	-0.2
4,155,209	-		Echvi_3504	0.20	-0.2
4,155,232	+		Echvi_3504	0.22	-1.7
4,155,286	+		Echvi_3504	0.27	-0.1
4,155,319	+		Echvi_3504	0.30	-0.3
4,155,515	+		Echvi_3504	0.48	-0.0
4,155,519	+		Echvi_3504	0.48	-0.4
4,155,519	+		Echvi_3504	0.48	+0.1
4,155,520	-		Echvi_3504	0.48	+0.3
4,155,552	+		Echvi_3504	0.51	-0.2
4,155,580	+		Echvi_3504	0.53	-0.1
4,155,581	-		Echvi_3504	0.53	+0.0
4,155,690	+		Echvi_3504	0.63	-0.4
4,155,720	+		Echvi_3504	0.66	-0.8
4,155,721	-		Echvi_3504	0.66	-0.0
4,155,768	+		Echvi_3504	0.70	-1.7
4,155,801	+		Echvi_3504	0.73	-1.9
4,155,899	+		Echvi_3504	0.82	-1.3
4,155,899	+		Echvi_3504	0.82	-0.5
4,155,899	+		Echvi_3504	0.82	-0.2
4,155,903	+		Echvi_3504	0.83	+0.6
4,155,969	+		Echvi_3504	0.89	-0.4
4,155,970	-		Echvi_3504	0.89	-0.8
4,155,970	-		Echvi_3504	0.89	+1.2
4,155,999	+				-0.3
4,156,000	-				-0.3
4,156,003	+				-0.0
4,156,003	+				+0.4
4,156,003	+				+1.5
4,156,003	+				-0.8
4,156,003	+				-1.9
4,156,004	-				-0.5
4,156,104	+				-0.2
4,156,178	+				+0.7
4,156,201	-				+0.3
4,156,223	+		Echvi_3505	0.29	-1.1
4,156,267	+		Echvi_3505	0.73	+0.9
4,156,294	+				+1.0
4,156,294	+				-0.7
4,156,295	-				-1.4
4,156,296	+				+0.3
4,156,296	+				+0.7
4,156,296	+				-0.9
4,156,296	+				-0.3
4,156,297	-				+0.8
4,156,297	-				-1.0
4,156,297	-				-1.6
4,156,297	-				+0.4
4,156,310	-				+1.1
4,156,361	+				-0.7
4,156,362	-				+0.4
4,156,457	-		Echvi_3506	0.14	+0.1
4,156,457	-		Echvi_3506	0.14	-0.2
4,156,457	-		Echvi_3506	0.14	-0.9
4,156,499	+		Echvi_3506	0.17	-0.3
4,156,499	+		Echvi_3506	0.17	+0.2
4,156,499	+		Echvi_3506	0.17	-0.4
4,156,500	-		Echvi_3506	0.18	+0.0
4,156,500	-		Echvi_3506	0.18	-0.4
4,156,500	-		Echvi_3506	0.18	+0.5
4,156,502	-		Echvi_3506	0.18	+0.1
4,156,527	-		Echvi_3506	0.20	+0.3
4,156,548	+		Echvi_3506	0.22	+2.2
4,156,559	+		Echvi_3506	0.23	-0.8
4,156,559	+		Echvi_3506	0.23	-0.1
4,156,615	-		Echvi_3506	0.28	+0.5
4,156,637	-		Echvi_3506	0.30	+0.9
4,156,680	+		Echvi_3506	0.34	-1.2
4,156,680	+		Echvi_3506	0.34	-0.1
4,156,681	-		Echvi_3506	0.34	+1.3
4,156,789	-		Echvi_3506	0.44	-0.2
4,156,810	+		Echvi_3506	0.46	-0.3
4,156,811	-		Echvi_3506	0.46	-1.4
4,156,869	-		Echvi_3506	0.51	+0.5
4,156,869	-		Echvi_3506	0.51	-0.4
4,156,869	-		Echvi_3506	0.51	+0.4
4,156,907	+		Echvi_3506	0.55	-1.5
4,156,907	+		Echvi_3506	0.55	+1.6
4,156,966	-		Echvi_3506	0.60	+0.8
4,156,966	-		Echvi_3506	0.60	-0.2
4,156,969	+		Echvi_3506	0.61	-0.1
4,156,969	+		Echvi_3506	0.61	-0.1
4,156,983	-		Echvi_3506	0.62	-0.5
4,156,983	-		Echvi_3506	0.62	+0.2
4,156,983	-		Echvi_3506	0.62	-2.1
4,157,016	+		Echvi_3506	0.65	+0.6
4,157,016	+		Echvi_3506	0.65	-0.2
4,157,017	-		Echvi_3506	0.65	-1.4
4,157,017	-		Echvi_3506	0.65	-0.1
4,157,017	-		Echvi_3506	0.65	+0.2
4,157,019	+		Echvi_3506	0.65	+1.2
4,157,041	-		Echvi_3506	0.67	-1.3
4,157,041	-		Echvi_3506	0.67	-0.6
4,157,051	-		Echvi_3506	0.68	-0.4
4,157,095	-		Echvi_3506	0.72	+1.7
4,157,126	+		Echvi_3506	0.75	+0.4
4,157,127	-		Echvi_3506	0.75	-2.1
4,157,128	+		Echvi_3506	0.75	+1.1
4,157,128	+		Echvi_3506	0.75	-0.7
4,157,128	+		Echvi_3506	0.75	-1.9
4,157,164	+		Echvi_3506	0.78	+0.6
4,157,193	+		Echvi_3506	0.81	-0.7
4,157,194	-		Echvi_3506	0.81	-2.2
4,157,194	-		Echvi_3506	0.81	-0.3
4,157,197	-		Echvi_3506	0.81	-0.8
4,157,238	+		Echvi_3506	0.85	-0.6
4,157,238	+		Echvi_3506	0.85	+0.2