Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3451

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
4,079,596	+				-0.0
4,079,596	+				-0.2
4,079,596	+				-0.6
4,079,596	+				+1.2
4,079,596	+				+0.1
4,079,597	-				+0.1
4,079,597	-				+0.6
4,079,649	+				+0.5
4,079,649	+				-1.2
4,079,690	-				+0.1
4,079,690	-				-0.3
4,079,700	+				+0.8
4,079,700	+				-1.3
4,079,700	+				+0.5
4,079,700	+				+0.7
4,079,700	+				-1.0
4,079,700	+				+0.9
4,079,701	-				-0.2
4,079,701	-				-0.1
4,079,701	-				-0.5
4,079,704	+				-0.2
4,079,704	+				-0.8
4,079,705	-				-0.1
4,079,705	-				+1.0
4,079,705	-				+0.1
4,079,820	+		Echvi_3450	0.21	+0.0
4,079,820	+		Echvi_3450	0.21	-1.2
4,079,822	+		Echvi_3450	0.21	-0.0
4,079,822	+		Echvi_3450	0.21	-0.5
4,079,823	-		Echvi_3450	0.21	-0.6
4,079,841	+		Echvi_3450	0.23	+0.8
4,079,877	+		Echvi_3450	0.28	+0.7
4,079,917	-		Echvi_3450	0.33	+0.4
4,080,021	-		Echvi_3450	0.47	+0.4
4,080,071	+		Echvi_3450	0.53	+0.4
4,080,119	-		Echvi_3450	0.60	+0.1
4,080,185	-		Echvi_3450	0.68	+1.0
4,080,188	+		Echvi_3450	0.68	-0.7
4,080,189	-		Echvi_3450	0.69	+0.5
4,080,189	-		Echvi_3450	0.69	-0.9
4,080,189	-		Echvi_3450	0.69	+0.8
4,080,275	+		Echvi_3450	0.80	-0.6
4,080,276	-		Echvi_3450	0.80	+0.2
4,080,276	-		Echvi_3450	0.80	+0.1
4,080,276	-		Echvi_3450	0.80	+0.6
4,080,327	+		Echvi_3450	0.87	+1.0
4,080,347	+		Echvi_3450	0.89	+0.6
4,080,352	-		Echvi_3450	0.90	+1.6
4,080,400	+				+0.4
4,080,400	+				+0.0
4,080,401	-				+0.6
4,080,401	-				-0.2
4,080,401	-				-0.8
4,080,466	+				+0.4
4,080,466	+				+1.4
4,080,466	+				-0.0
4,080,466	+				+0.1
4,080,466	+				+0.9
4,080,467	-				-1.3
4,080,513	-				+0.2
4,080,549	+				-2.1
4,080,549	+				-0.1
4,080,565	-				-0.4
4,080,649	-		Echvi_3451	0.29	+0.7
4,080,706	-		Echvi_3451	0.54	+1.2
4,080,795	+				+0.6
4,080,795	+				+0.6
4,080,795	+				+0.3
4,080,796	-				+0.2
4,080,796	-				-2.5
4,080,820	+				+1.0
4,080,824	+				+0.1
4,080,825	-				-0.5
4,080,825	-				-1.0
4,080,835	+				-0.5
4,080,836	-				-1.1
4,080,851	+				+1.3
4,080,851	+				+0.5
4,080,851	+				+1.7
4,080,852	-				+1.1
4,080,886	-				-1.0
4,080,906	-				-0.4
4,080,912	+				-0.3
4,080,917	+				+0.3
4,080,918	-				+0.4
4,080,947	+				+0.0
4,080,976	-				+0.4
4,081,001	+				+0.4
4,081,002	-				+0.0
4,081,003	+				-0.5
4,081,004	-				+0.1
4,081,004	-				-0.0
4,081,122	-				-0.4
4,081,293	+		Echvi_3452	0.10	+0.2
4,081,293	+		Echvi_3452	0.10	-1.0
4,081,305	+		Echvi_3452	0.11	+0.1
4,081,306	-		Echvi_3452	0.11	+0.2
4,081,358	-		Echvi_3452	0.13	+0.2
4,081,448	+		Echvi_3452	0.16	+0.0
4,081,449	-		Echvi_3452	0.16	-0.6
4,081,449	-		Echvi_3452	0.16	-0.5
4,081,527	+		Echvi_3452	0.19	+0.4
4,081,570	-		Echvi_3452	0.21	-1.0
4,081,627	-		Echvi_3452	0.23	+0.1
4,081,627	-		Echvi_3452	0.23	-0.1
4,081,672	-		Echvi_3452	0.25	-1.3
4,081,702	+		Echvi_3452	0.26	-0.4