Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3376

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,982,070	-		Echvi_3375	0.38	+0.0
3,982,084	-		Echvi_3375	0.40	-0.1
3,982,113	+		Echvi_3375	0.42	+0.4
3,982,113	+		Echvi_3375	0.42	-0.3
3,982,114	-		Echvi_3375	0.42	-0.0
3,982,114	-		Echvi_3375	0.42	-1.3
3,982,114	-		Echvi_3375	0.42	+0.3
3,982,154	+		Echvi_3375	0.46	+0.9
3,982,155	-		Echvi_3375	0.46	-0.2
3,982,221	-		Echvi_3375	0.52	+0.0
3,982,288	-		Echvi_3375	0.57	+0.3
3,982,303	-		Echvi_3375	0.59	-0.4
3,982,320	+		Echvi_3375	0.60	-0.0
3,982,320	+		Echvi_3375	0.60	-1.4
3,982,334	-		Echvi_3375	0.61	-0.0
3,982,338	+		Echvi_3375	0.62	-0.5
3,982,339	-		Echvi_3375	0.62	+0.8
3,982,339	-		Echvi_3375	0.62	-0.4
3,982,342	+		Echvi_3375	0.62	+0.7
3,982,398	+		Echvi_3375	0.67	+0.7
3,982,425	-		Echvi_3375	0.69	+1.2
3,982,542	+		Echvi_3375	0.79	+0.5
3,982,543	-		Echvi_3375	0.80	+0.0
3,982,556	-		Echvi_3375	0.81	+0.1
3,982,744	+				-1.4
3,982,748	+				-1.1
3,982,748	+				+0.5
3,982,748	+				+1.0
3,982,748	+				+0.8
3,982,749	-				-1.5
3,982,749	-				-0.1
3,982,749	-				+0.2
3,982,749	-				+0.5
3,982,780	+				-0.5
3,982,780	+				-1.2
3,982,781	-				-0.4
3,982,781	-				+0.3
3,982,783	+				+0.0
3,982,784	-				+0.1
3,982,784	-				+1.0
3,982,784	-				+0.3
3,982,821	+				+0.6
3,982,856	-				-0.0
3,982,925	+				+1.6
3,982,964	+				+1.6
3,982,965	-				+0.8
3,982,974	+				+0.2
3,982,978	+				+0.3
3,983,045	+				-0.1
3,983,046	-				-1.5
3,983,046	-				+1.3
3,983,080	-				-0.6
3,983,211	+		Echvi_3376	0.24	-0.2
3,983,260	+		Echvi_3376	0.30	-0.1
3,983,260	+		Echvi_3376	0.30	-1.3
3,983,261	-		Echvi_3376	0.30	+0.2
3,983,261	-		Echvi_3376	0.30	-0.3
3,983,374	+		Echvi_3376	0.43	-0.8
3,983,444	+		Echvi_3376	0.51	+3.4
3,983,534	-		Echvi_3376	0.62	+0.0
3,983,630	-		Echvi_3376	0.73	-0.5
3,983,630	-		Echvi_3376	0.73	-0.8
3,983,630	-		Echvi_3376	0.73	-0.4
3,983,676	+		Echvi_3376	0.79	+0.7
3,983,676	+		Echvi_3376	0.79	+0.4
3,983,677	-		Echvi_3376	0.79	-0.9
3,983,700	-		Echvi_3376	0.81	+1.7
3,983,700	-		Echvi_3376	0.81	-0.2
3,983,833	-				-0.3
3,983,833	-				-0.6
3,983,833	-				+0.3
3,983,833	-				-1.6
3,983,919	+				-1.7
3,984,054	+				-1.1
3,984,055	-				-0.5
3,984,055	-				-0.1
3,984,055	-				-0.3
3,984,057	+				-0.2
3,984,057	+				+0.3
3,984,058	-				-2.5
3,984,058	-				+1.8
3,984,058	-				-0.1
3,984,058	-				-3.7
3,984,061	+				+1.1
3,984,061	+				+0.1
3,984,097	+				-0.1
3,984,097	+				+1.0
3,984,131	-				-0.3
3,984,131	-				-0.9
3,984,148	+				-1.3
3,984,148	+				-0.8
3,984,149	-				+0.9
3,984,149	-				+0.6
3,984,186	-				+0.7
3,984,201	+				+0.5
3,984,202	-				+1.6
3,984,202	-				-1.6
3,984,210	+				+1.0
3,984,213	-				-0.8
3,984,222	+				-0.0
3,984,222	+				-0.9
3,984,222	+				+1.0
3,984,222	+				-1.1
3,984,223	-				-0.9
3,984,223	-				+0.1
3,984,223	-				+2.1
3,984,225	+				+0.9
3,984,226	-				-0.8
3,984,282	+		Echvi_3377	0.21	-1.6
3,984,283	-		Echvi_3377	0.22	+0.1
3,984,356	-		Echvi_3377	0.37	+0.5
3,984,356	-		Echvi_3377	0.37	-1.2
3,984,427	-		Echvi_3377	0.53	-1.4
3,984,471	+		Echvi_3377	0.63	+0.7
3,984,564	+		Echvi_3377	0.83	+0.4
3,984,565	-		Echvi_3377	0.83	-0.1
3,984,565	-		Echvi_3377	0.83	+1.5
3,984,606	-				-0.2
3,984,755	-		Echvi_3378	0.17	-2.0
3,984,765	-		Echvi_3378	0.20	-1.2
3,984,844	-		Echvi_3378	0.46	+1.3
3,984,845	+		Echvi_3378	0.46	+1.5
3,984,846	-		Echvi_3378	0.47	+1.1