Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3111

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,717,966	+				+2.2
3,717,966	+				+2.0
3,717,971	+				+0.9
3,717,971	+				+2.3
3,718,003	+				+2.4
3,718,004	-				-0.6
3,718,126	-		Echvi_3110	0.20	-0.4
3,718,138	+		Echvi_3110	0.21	+2.9
3,718,144	+		Echvi_3110	0.22	+2.1
3,718,144	+		Echvi_3110	0.22	+1.4
3,718,148	+		Echvi_3110	0.22	+2.2
3,718,148	+		Echvi_3110	0.22	+2.4
3,718,149	-		Echvi_3110	0.23	-0.7
3,718,149	-		Echvi_3110	0.23	+0.6
3,718,149	-		Echvi_3110	0.23	+0.7
3,718,187	-		Echvi_3110	0.27	-0.1
3,718,223	-		Echvi_3110	0.31	-0.5
3,718,254	-		Echvi_3110	0.35	-1.4
3,718,270	-		Echvi_3110	0.36	+0.7
3,718,295	-		Echvi_3110	0.39	+0.5
3,718,348	+		Echvi_3110	0.45	+2.3
3,718,348	+		Echvi_3110	0.45	+2.5
3,718,360	-		Echvi_3110	0.47	-0.3
3,718,477	+		Echvi_3110	0.60	+2.9
3,718,477	+		Echvi_3110	0.60	+2.4
3,718,478	-		Echvi_3110	0.60	+0.4
3,718,631	+		Echvi_3110	0.78	+2.4
3,718,631	+		Echvi_3110	0.78	+2.3
3,718,632	-		Echvi_3110	0.78	-1.5
3,718,632	-		Echvi_3110	0.78	+1.5
3,718,632	-		Echvi_3110	0.78	+0.9
3,718,702	+		Echvi_3110	0.86	+3.0
3,718,741	-				+0.5
3,718,754	+				+2.9
3,718,754	+				+2.8
3,718,754	+				+3.4
3,718,754	+				+3.0
3,718,755	-				-1.2
3,718,755	-				+1.0
3,718,755	-				-1.3
3,718,826	+				+2.2
3,718,826	+				+2.6
3,718,827	-				-1.6
3,718,827	-				-0.3
3,718,831	+				+3.7
3,718,831	+				+1.7
3,718,844	-				-0.4
3,718,844	-				-1.2
3,718,844	-				+1.1
3,718,851	+				+0.5
3,718,895	-				+1.9
3,718,956	-		Echvi_3111	0.10	-0.4
3,719,059	-		Echvi_3111	0.20	-1.3
3,719,074	-		Echvi_3111	0.21	-0.2
3,719,077	-		Echvi_3111	0.22	+1.3
3,719,165	-		Echvi_3111	0.30	+0.5
3,719,165	-		Echvi_3111	0.30	-0.1
3,719,166	+		Echvi_3111	0.30	+0.4
3,719,166	+		Echvi_3111	0.30	+1.0
3,719,166	+		Echvi_3111	0.30	+0.9
3,719,167	-		Echvi_3111	0.30	-3.0
3,719,167	-		Echvi_3111	0.30	-0.5
3,719,167	-		Echvi_3111	0.30	+0.1
3,719,167	-		Echvi_3111	0.30	+0.4
3,719,207	-		Echvi_3111	0.34	-1.7
3,719,282	-		Echvi_3111	0.41	-0.5
3,719,282	-		Echvi_3111	0.41	-0.6
3,719,295	+		Echvi_3111	0.42	+1.6
3,719,296	-		Echvi_3111	0.42	-0.9
3,719,300	-		Echvi_3111	0.42	+0.3
3,719,313	-		Echvi_3111	0.44	-0.8
3,719,314	+		Echvi_3111	0.44	+0.9
3,719,314	+		Echvi_3111	0.44	+0.6
3,719,314	+		Echvi_3111	0.44	+1.5
3,719,315	-		Echvi_3111	0.44	+0.0
3,719,315	-		Echvi_3111	0.44	+0.7
3,719,326	+		Echvi_3111	0.45	+1.2
3,719,414	+		Echvi_3111	0.53	+2.6
3,719,415	-		Echvi_3111	0.53	+1.4
3,719,417	+		Echvi_3111	0.53	+1.9
3,719,417	+		Echvi_3111	0.53	+0.4
3,719,434	+		Echvi_3111	0.55	+1.7
3,719,435	-		Echvi_3111	0.55	-0.5
3,719,496	-		Echvi_3111	0.61	+0.4
3,719,588	+		Echvi_3111	0.69	+0.3
3,719,589	-		Echvi_3111	0.69	+0.1
3,719,594	-		Echvi_3111	0.70	-1.1
3,719,691	+		Echvi_3111	0.79	+0.2
3,719,860	-				+0.0
3,719,860	-				-0.4
3,719,860	-				-2.5
3,719,913	+				+0.9
3,719,914	-				+0.8
3,719,976	-				+0.9
3,719,990	-				-0.7
3,720,110	+		Echvi_3112	0.24	+1.6
3,720,111	-		Echvi_3112	0.24	+0.1
3,720,187	-		Echvi_3112	0.33	+0.2
3,720,187	-		Echvi_3112	0.33	+0.5
3,720,449	+		Echvi_3112	0.66	-1.0
3,720,489	-		Echvi_3112	0.70	+0.4
3,720,583	-		Echvi_3112	0.82	+1.9
3,720,583	-		Echvi_3112	0.82	+1.0
3,720,676	-				-0.5
3,720,676	-				+0.2
3,720,676	-				+1.3
3,720,697	-				-0.5
3,720,697	-				-0.7
3,720,707	-				+0.4
3,720,707	-				-2.1
3,720,707	-				+0.3
3,720,707	-				-0.1
3,720,707	-				+0.5
3,720,707	-				+0.1
3,720,707	-				+0.4
3,720,707	-				-1.2
3,720,718	-				+0.3
3,720,728	-				+1.0
3,720,728	-				+1.1
3,720,728	-				+0.2
3,720,763	+				+0.9
3,720,763	+				+0.9
3,720,764	-				+0.6
3,720,764	-				-0.5
3,720,764	-				-0.5
3,720,764	-				-0.7
3,720,777	-				-0.7
3,720,796	+				+0.0
3,720,797	-				+0.7
3,720,807	+				+1.3
3,720,862	+		Echvi_3113	0.12	+2.6
3,720,863	-		Echvi_3113	0.12	+2.0
3,720,863	-		Echvi_3113	0.12	+0.6