Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3040

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,630,153	+				-2.2
3,630,154	-				-0.5
3,630,178	+				+1.5
3,630,192	+				+0.0
3,630,193	-				+0.0
3,630,193	-				+0.0
3,630,193	-				-0.2
3,630,201	-				+0.9
3,630,212	-				-0.5
3,630,269	-				-0.1
3,630,292	+		Echvi_3039	0.15	-1.6
3,630,317	+		Echvi_3039	0.26	-1.1
3,630,318	-		Echvi_3039	0.26	+0.1
3,630,342	-		Echvi_3039	0.36	-1.5
3,630,371	+		Echvi_3039	0.49	-0.4
3,630,373	+		Echvi_3039	0.50	+0.5
3,630,373	+		Echvi_3039	0.50	+0.8
3,630,373	+		Echvi_3039	0.50	+0.5
3,630,373	+		Echvi_3039	0.50	-1.1
3,630,378	-		Echvi_3039	0.52	+1.0
3,630,378	-		Echvi_3039	0.52	+0.2
3,630,427	+		Echvi_3039	0.73	-0.2
3,630,428	-		Echvi_3039	0.73	-0.2
3,630,429	+		Echvi_3039	0.74	+0.2
3,630,429	+		Echvi_3039	0.74	-0.4
3,630,429	+		Echvi_3039	0.74	-0.8
3,630,452	+		Echvi_3039	0.83	+1.4
3,630,453	-		Echvi_3039	0.84	-1.5
3,630,453	-		Echvi_3039	0.84	+0.1
3,630,488	+				-0.2
3,630,488	+				+0.7
3,630,533	+				-1.1
3,630,537	-				+3.0
3,630,546	+				-0.3
3,630,546	+				-0.5
3,630,546	+				+0.3
3,630,547	-				+0.5
3,630,547	-				+0.4
3,630,568	+				+0.4
3,630,568	+				+0.1
3,630,569	-				-0.9
3,630,569	-				-0.7
3,630,569	-				+0.1
3,630,569	-				+1.0
3,630,600	+				-0.0
3,630,650	+				-1.7
3,630,650	+				-2.4
3,630,651	-				+0.2
3,630,651	-				+1.5
3,630,678	+				-1.4
3,630,686	+				+1.5
3,630,686	+				-0.4
3,630,687	-				+0.8
3,630,687	-				-0.6
3,630,697	+				+0.6
3,630,697	+				+0.6
3,630,697	+				+1.1
3,630,698	-				+0.3
3,630,698	-				+0.3
3,630,703	-				+0.2
3,630,703	-				-1.1
3,630,717	-				+0.9
3,630,746	-				+0.5
3,630,750	+				+0.0
3,630,751	-				+0.3
3,630,751	-				+1.5
3,630,751	-				+0.4
3,630,757	-				-2.8
3,630,763	+				+0.2
3,630,763	+				+0.1
3,630,763	+				+0.2
3,630,763	+				-0.2
3,630,764	-				-0.7
3,630,764	-				-0.4
3,630,778	+				+0.4
3,630,786	+				-0.6
3,630,786	+				-1.6
3,630,787	-				-0.7
3,630,787	-				-0.1
3,630,852	+				+0.6
3,630,853	-				-0.0
3,630,931	+				+1.5
3,630,932	-				-0.3
3,630,946	-				+0.1
3,630,975	+				+1.2
3,630,976	-				-0.5
3,630,976	-				-0.1
3,630,987	-				+0.2
3,631,004	+				-0.3
3,631,005	-				-1.8
3,631,014	-				-0.5
3,631,026	+				+1.5
3,631,026	+				+0.6
3,631,026	+				+1.0
3,631,027	-				-0.8
3,631,027	-				+0.6
3,631,027	-				-2.9
3,631,027	-				-0.7
3,631,027	-				-0.5
3,631,028	+				+0.1
3,631,029	-				-0.4
3,631,029	-				-0.3
3,631,029	-				-2.1
3,631,029	-				+0.2
3,631,066	+				-1.7
3,631,067	-				+0.0
3,631,067	-				-1.1
3,631,136	+				-0.4
3,631,137	-				-0.5
3,631,137	-				+0.0
3,631,140	+				-0.5
3,631,140	+				-0.5
3,631,140	+				-0.1
3,631,140	+				+1.5
3,631,140	+				+0.2
3,631,140	+				+0.8
3,631,140	+				-1.5
3,631,140	+				-0.2
3,631,141	-				-0.5
3,631,141	-				-1.2
3,631,141	-				-0.1
3,631,141	-				+1.0
3,631,141	-				-0.1
3,631,142	+				+1.5
3,631,143	-				-1.8
3,631,143	-				+0.4
3,631,266	-		Echvi_3040	0.12	+0.3
3,631,266	-		Echvi_3040	0.12	+0.5
3,631,284	+		Echvi_3040	0.14	-0.1
3,631,285	-		Echvi_3040	0.14	-0.8
3,631,331	-		Echvi_3040	0.19	+0.7
3,631,348	+		Echvi_3040	0.21	+0.8
3,631,365	+		Echvi_3040	0.23	+1.1
3,631,365	+		Echvi_3040	0.23	+0.5
3,631,365	+		Echvi_3040	0.23	+1.0
3,631,365	+		Echvi_3040	0.23	+0.3
3,631,451	-		Echvi_3040	0.31	+0.2
3,631,476	+		Echvi_3040	0.34	+1.1
3,631,476	+		Echvi_3040	0.34	-0.0
3,631,476	+		Echvi_3040	0.34	+0.7
3,631,504	+		Echvi_3040	0.37	+0.3
3,631,512	+		Echvi_3040	0.38	+2.8
3,631,576	-		Echvi_3040	0.44	-0.7
3,631,622	+		Echvi_3040	0.49	-0.2
3,631,661	+		Echvi_3040	0.53	+2.0
3,631,679	+		Echvi_3040	0.55	+0.6
3,631,679	+		Echvi_3040	0.55	-1.4
3,631,679	+		Echvi_3040	0.55	+0.2
3,631,680	-		Echvi_3040	0.55	+0.2
3,631,883	-		Echvi_3040	0.76	+0.3
3,631,914	-		Echvi_3040	0.79	+1.3
3,631,917	-		Echvi_3040	0.79	-0.1
3,631,917	-		Echvi_3040	0.79	-0.1
3,631,918	+		Echvi_3040	0.79	+1.0
3,631,919	-		Echvi_3040	0.79	+0.5
3,631,924	+		Echvi_3040	0.80	+0.5
3,631,925	-		Echvi_3040	0.80	-0.1
3,631,945	+		Echvi_3040	0.82	+0.3
3,631,974	-		Echvi_3040	0.85	+0.8
3,631,974	-		Echvi_3040	0.85	+0.4
3,631,981	-		Echvi_3040	0.86	+0.9
3,631,990	+		Echvi_3040	0.87	+1.5
3,631,990	+		Echvi_3040	0.87	+1.4
3,631,990	+		Echvi_3040	0.87	-0.1
3,631,990	+		Echvi_3040	0.87	-1.3
3,631,990	+		Echvi_3040	0.87	+1.9
3,631,991	-		Echvi_3040	0.87	+1.1
3,631,993	+		Echvi_3040	0.87	+1.6
3,632,045	-				+0.7
3,632,079	-				+0.4
3,632,100	-				+0.9
3,632,123	-				+0.1
3,632,136	+				+1.0
3,632,209	+				+1.1
3,632,240	+				+1.3
3,632,240	+				+1.8
3,632,244	+				+1.5
3,632,244	+				+1.5