Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3029

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,618,326	+		Echvi_3028	0.55	-0.1
3,618,327	-		Echvi_3028	0.55	-1.3
3,618,327	-		Echvi_3028	0.55	-0.7
3,618,333	+		Echvi_3028	0.55	-0.5
3,618,333	+		Echvi_3028	0.55	+1.0
3,618,333	+		Echvi_3028	0.55	+0.1
3,618,333	+				+0.9
3,618,333	+		Echvi_3028	0.55	-0.3
3,618,334	-		Echvi_3028	0.55	-0.3
3,618,334	-		Echvi_3028	0.55	+0.4
3,618,385	-		Echvi_3028	0.59	+0.1
3,618,385	-		Echvi_3028	0.59	-0.1
3,618,388	+		Echvi_3028	0.59	-0.1
3,618,420	+		Echvi_3028	0.61	+0.4
3,618,420	+		Echvi_3028	0.61	+0.1
3,618,453	+		Echvi_3028	0.64	-0.7
3,618,454	-		Echvi_3028	0.64	-0.7
3,618,459	-		Echvi_3028	0.64	-2.3
3,618,459	-		Echvi_3028	0.64	+0.7
3,618,506	+		Echvi_3028	0.68	-0.3
3,618,507	-		Echvi_3028	0.68	+0.8
3,618,520	+		Echvi_3028	0.68	+0.2
3,618,520	+		Echvi_3028	0.68	+1.3
3,618,521	-		Echvi_3028	0.69	-2.3
3,618,521	-		Echvi_3028	0.69	-0.6
3,618,527	+		Echvi_3028	0.69	-1.0
3,618,528	-		Echvi_3028	0.69	-0.9
3,618,547	+		Echvi_3028	0.70	+0.3
3,618,552	+		Echvi_3028	0.71	+0.6
3,618,553	-		Echvi_3028	0.71	-0.5
3,618,553	-		Echvi_3028	0.71	-0.5
3,618,585	+		Echvi_3028	0.73	-0.8
3,618,585	+		Echvi_3028	0.73	+0.3
3,618,585	+		Echvi_3028	0.73	-1.6
3,618,589	+		Echvi_3028	0.73	+1.4
3,618,589	+		Echvi_3028	0.73	-0.2
3,618,614	-		Echvi_3028	0.75	-0.4
3,618,708	+		Echvi_3028	0.82	-0.4
3,618,750	+		Echvi_3028	0.85	-1.4
3,618,757	-		Echvi_3028	0.85	-0.5
3,618,775	-		Echvi_3028	0.86	-2.2
3,618,778	-		Echvi_3028	0.87	+0.5
3,618,851	+				+0.4
3,618,964	+				+0.3
3,619,026	+				-0.6
3,619,035	+				+0.5
3,619,036	-				-0.2
3,619,036	-				+3.8
3,619,036	-				-0.8
3,619,067	+				-0.1
3,619,078	-				-0.5
3,619,089	-				-0.5
3,619,145	+				-1.5
3,619,145	+				-0.2
3,620,280	-				-0.1
3,620,288	-				+0.1
3,620,292	+				+0.7
3,620,292	+				+0.3
3,620,292	+				-0.0
3,620,297	+				-0.7
3,620,297	+				+0.3
3,620,297	+				+1.9
3,620,298	-				+0.2
3,620,298	-				+0.1
3,620,298	-				-0.1
3,620,298	-				+0.7
3,620,301	+				+0.3
3,620,302	-				-1.1
3,620,352	+				+0.5
3,620,372	+				+0.2
3,620,372	+				+0.2
3,620,372	+				-0.6
3,620,375	+				+1.7
3,620,375	+				+0.2
3,620,375	+				-0.4
3,620,376	-				+0.1
3,620,376	-				-0.7
3,620,379	+				+0.3
3,620,379	+				+2.1
3,620,380	-				+0.3
3,620,409	+				-0.6
3,620,409	+				+0.1
3,620,409	+				-0.8
3,620,409	+				+0.1
3,620,409	+				+0.3
3,620,409	+				-0.2
3,620,409	+				-0.7
3,620,410	-				+1.5
3,620,410	-				+0.2
3,620,410	-				-0.6
3,620,411	+				+0.2
3,620,412	-				+0.2
3,620,412	-				-0.2
3,620,412	-				+1.4
3,620,412	-				-0.2
3,620,412	-				+1.5
3,620,459	-				-0.6
3,620,462	+				-0.9
3,620,462	+				+2.5
3,620,462	+				-0.2
3,620,463	-				-0.1
3,620,463	-				+0.7
3,620,466	+				+0.7
3,620,466	+				+0.1
3,620,466	+				+1.1
3,620,466	+				-1.0
3,620,466	+				-0.3
3,620,467	-				-0.0
3,620,467	-				+1.0
3,620,467	-				+0.2
3,620,467	-				+0.0
3,620,467	-				-0.3
3,620,467	-				+0.2
3,620,478	-				-2.7
3,620,478	-				-0.1
3,620,530	-				-0.7
3,620,765	+		Echvi_3030	0.22	+1.1
3,620,770	+		Echvi_3030	0.23	+0.5
3,620,887	-		Echvi_3030	0.38	-1.2
3,620,952	-		Echvi_3030	0.46	-1.2
3,620,957	-		Echvi_3030	0.47	+0.0
3,621,012	+		Echvi_3030	0.54	+0.2
3,621,012	+		Echvi_3030	0.54	+0.7
3,621,012	+		Echvi_3030	0.54	+0.6
3,621,013	-		Echvi_3030	0.54	+0.7
3,621,013	-		Echvi_3030	0.54	-2.0
3,621,013	-		Echvi_3030	0.54	-2.8
3,621,013	-		Echvi_3030	0.54	-0.1
3,621,077	+		Echvi_3030	0.63	+0.1
3,621,077	+		Echvi_3030	0.63	+0.0
3,621,077	+		Echvi_3030	0.63	+0.8
3,621,122	-		Echvi_3030	0.69	-0.1
3,621,167	-		Echvi_3030	0.75	-0.9
3,621,237	+		Echvi_3030	0.84	+0.2
3,621,237	+		Echvi_3030	0.84	-0.3
3,621,238	-		Echvi_3030	0.84	-2.8