Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2904

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,478,230	-		Echvi_2903	0.22	+0.4
3,478,235	-		Echvi_2903	0.22	+0.9
3,478,244	-		Echvi_2903	0.23	+0.9
3,478,250	-		Echvi_2903	0.24	-1.0
3,478,322	+		Echvi_2903	0.30	-0.3
3,478,322	+		Echvi_2903	0.30	+0.5
3,478,329	-		Echvi_2903	0.30	-1.3
3,478,624	+		Echvi_2903	0.55	-1.3
3,478,625	-		Echvi_2903	0.55	-0.1
3,478,712	+		Echvi_2903	0.63	-0.5
3,478,713	-		Echvi_2903	0.63	-0.1
3,478,955	+		Echvi_2903	0.83	-0.1
3,478,960	+		Echvi_2903	0.84	+0.4
3,478,960	+		Echvi_2903	0.84	-1.0
3,478,997	+		Echvi_2903	0.87	+0.4
3,478,997	+		Echvi_2903	0.87	+0.0
3,478,998	-		Echvi_2903	0.87	+0.2
3,478,998	-		Echvi_2903	0.87	-0.7
3,479,012	+		Echvi_2903	0.88	-0.0
3,479,018	-		Echvi_2903	0.89	+0.2
3,479,021	+		Echvi_2903	0.89	+1.0
3,479,022	-		Echvi_2903	0.89	-0.2
3,479,022	-		Echvi_2903	0.89	+0.7
3,479,022	-		Echvi_2903	0.89	+1.8
3,479,045	-				-0.6
3,479,141	+				+0.3
3,479,142	-				-1.4
3,479,149	+				-0.1
3,479,164	+				+0.4
3,479,164	+				+1.0
3,479,164	+				-0.6
3,479,164	+				-0.8
3,479,165	-				+0.9
3,479,183	+				-0.6
3,479,183	+				-0.2
3,479,183	+				-0.5
3,479,184	-				+1.2
3,479,184	-				+0.6
3,479,255	+		Echvi_2904	0.16	-1.0
3,479,256	-		Echvi_2904	0.17	+2.6
3,479,277	-		Echvi_2904	0.22	+2.3
3,479,286	+		Echvi_2904	0.24	-1.3
3,479,301	+		Echvi_2904	0.27	-0.3
3,479,304	+		Echvi_2904	0.28	-0.9
3,479,306	+		Echvi_2904	0.29	-0.4
3,479,307	-		Echvi_2904	0.29	+2.6
3,479,307	-		Echvi_2904	0.29	+2.8
3,479,324	-		Echvi_2904	0.33	+2.1
3,479,425	+		Echvi_2904	0.58	-1.3
3,479,425	+		Echvi_2904	0.58	-1.0
3,479,425	+		Echvi_2904	0.58	-0.2
3,479,426	-		Echvi_2904	0.58	+4.1
3,479,431	+		Echvi_2904	0.59	+0.2
3,479,432	-		Echvi_2904	0.59	+3.3
3,479,488	+		Echvi_2904	0.73	-1.5
3,479,488	+		Echvi_2904	0.73	-0.2
3,479,488	+		Echvi_2904	0.73	-0.8
3,479,488	+		Echvi_2904	0.73	+0.0
3,479,489	-		Echvi_2904	0.73	+2.8
3,479,489	-		Echvi_2904	0.73	+3.2
3,479,569	+				+0.0
3,479,569	+				+0.2
3,479,570	-				+3.0
3,479,574	+				+0.4
3,479,598	+				+1.1
3,479,599	-				+3.3
3,479,641	-				+0.0
3,479,658	+				-0.8
3,479,703	-				+0.3
3,479,783	+				-0.1
3,479,783	+				+0.7
3,479,786	-				-0.3
3,479,834	+				+1.1
3,479,840	+				+0.6
3,479,841	-				+0.7
3,479,853	+				+0.4
3,479,939	+				-0.3
3,479,939	+				+0.1
3,479,940	-				+0.4
3,479,940	-				+1.2
3,479,942	+				-0.0
3,479,943	-				+0.2
3,480,004	+				+0.0
3,480,026	+				+0.3
3,480,027	-				+0.9
3,480,059	-				+1.0
3,480,093	-				-0.7
3,480,104	-				+1.2
3,480,111	+				+0.7
3,480,111	+				+0.6
3,480,112	-				+0.2
3,480,132	+				-0.1
3,480,133	-				-0.3
3,480,205	-		Echvi_2905	0.13	-1.8
3,480,364	-		Echvi_2905	0.19	-0.0
3,480,376	-		Echvi_2905	0.19	+0.5
3,480,443	-		Echvi_2905	0.22	+0.3
3,480,495	-		Echvi_2905	0.24	-0.6
3,480,501	+		Echvi_2905	0.24	-0.5
3,480,502	-		Echvi_2905	0.24	-0.8
3,480,569	+		Echvi_2905	0.26	+1.3
3,480,577	+		Echvi_2905	0.27	+0.1
3,480,578	-		Echvi_2905	0.27	+1.2