Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2446
Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Polymyxin B sulfate 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,904,393 | - | Echvi_2445 | 0.70 | -0.3 | |
2,904,393 | - | Echvi_2445 | 0.70 | +1.0 | |
2,904,472 | - | Echvi_2445 | 0.73 | +1.1 | |
2,904,574 | - | Echvi_2445 | 0.76 | -0.2 | |
2,904,708 | + | Echvi_2445 | 0.81 | +2.0 | |
2,904,787 | - | Echvi_2445 | 0.84 | -1.0 | |
2,904,852 | + | Echvi_2445 | 0.86 | -0.8 | |
2,904,853 | - | Echvi_2445 | 0.86 | -0.4 | |
2,904,907 | - | Echvi_2445 | 0.88 | -1.0 | |
2,904,921 | - | Echvi_2445 | 0.88 | +0.2 | |
2,905,016 | - | -0.1 | |||
2,905,147 | - | +1.3 | |||
2,905,149 | - | +0.7 | |||
2,905,181 | - | +1.5 | |||
2,905,195 | - | +0.8 | |||
2,905,330 | + | -2.1 | |||
2,906,740 | + | -1.0 | |||
2,906,741 | - | +0.5 | |||
2,906,963 | + | Echvi_2447 | 0.22 | +0.3 | |
2,906,985 | + | Echvi_2447 | 0.24 | -1.0 | |
2,907,175 | + | Echvi_2447 | 0.39 | +0.4 | |
2,907,179 | + | Echvi_2447 | 0.40 | -0.6 | |
2,907,181 | + | Echvi_2447 | 0.40 | +0.7 | |
2,907,222 | + | Echvi_2447 | 0.43 | -0.6 | |
2,907,223 | - | Echvi_2447 | 0.43 | -0.2 | |
2,907,243 | + | Echvi_2447 | 0.45 | +0.5 | |
2,907,264 | - | Echvi_2447 | 0.46 | -0.8 | |
2,907,298 | + | Echvi_2447 | 0.49 | -2.5 | |
2,907,299 | - | Echvi_2447 | 0.49 | +0.4 | |
2,907,495 | + | Echvi_2447 | 0.65 | +1.8 | |
2,907,567 | - | Echvi_2447 | 0.70 | +1.8 |
Or see this region's nucleotide sequence