Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2379

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,819,136	+		Echvi_2378	0.81	-2.2
2,819,137	-		Echvi_2378	0.81	+0.2
2,819,137	-		Echvi_2378	0.81	-4.0
2,819,137	-		Echvi_2378	0.81	-4.1
2,819,137	-		Echvi_2378	0.81	-2.9
2,819,137	-		Echvi_2378	0.81	-2.9
2,819,173	-		Echvi_2378	0.82	-3.0
2,819,175	-		Echvi_2378	0.82	-2.3
2,819,256	-		Echvi_2378	0.84	-3.5
2,819,259	-		Echvi_2378	0.84	-3.6
2,819,268	+		Echvi_2378	0.84	-0.9
2,819,269	-		Echvi_2378	0.84	-0.8
2,819,269	-		Echvi_2378	0.84	-0.6
2,819,332	+		Echvi_2378	0.85	-1.1
2,819,333	-		Echvi_2378	0.85	-2.2
2,819,333	-		Echvi_2378	0.85	-3.9
2,819,370	+		Echvi_2378	0.86	-0.1
2,819,380	+		Echvi_2378	0.86	-1.6
2,819,463	+		Echvi_2378	0.88	-2.0
2,819,629	+				-2.7
2,819,629	+				-3.1
2,819,630	-				-1.7
2,819,694	+				-0.6
2,819,695	-				-2.1
2,819,695	-				-2.9
2,819,731	+				-3.4
2,819,731	+				-3.5
2,819,731	+				-2.4
2,819,732	-				-2.6
2,819,732	-				-4.0
2,819,732	-				-2.9
2,819,732	-				-2.7
2,819,732	-				-0.3
2,819,857	-				-0.6
2,819,857	-				-1.5
2,819,860	+				+0.7
2,819,921	-				-2.2
2,819,935	+				-1.0
2,819,935	+				-5.1
2,819,936	-				-0.6
2,819,957	+				-2.4
2,819,958	-				-3.5
2,819,962	+				-0.6
2,820,014	-				-1.6
2,820,014	-				-2.3
2,820,055	+				+0.4
2,820,055	+				-2.5
2,820,055	+				+0.6
2,820,056	-				-2.7
2,820,056	-				-1.2
2,820,056	-				-1.1
2,820,056	-				-0.8
2,820,056	-				-1.1
2,820,056	-				-0.5
2,820,088	-				-2.9
2,820,100	+				-0.0
2,820,100	+				-1.0
2,820,151	+				-1.1
2,820,152	-				-1.7
2,820,199	-				-2.4
2,820,325	+				-1.4
2,820,325	+				-2.8
2,820,397	+		Echvi_2379	0.13	-2.8
2,820,548	-		Echvi_2379	0.19	-1.8
2,820,580	-		Echvi_2379	0.21	-1.5
2,820,629	+		Echvi_2379	0.23	-2.0
2,820,664	-		Echvi_2379	0.24	-0.5
2,820,697	-		Echvi_2379	0.26	-2.7
2,820,702	-		Echvi_2379	0.26	-2.4
2,820,737	+		Echvi_2379	0.28	-0.8
2,820,760	+		Echvi_2379	0.29	-2.8
2,820,761	-		Echvi_2379	0.29	-2.6
2,820,829	+		Echvi_2379	0.32	-1.5
2,820,831	+		Echvi_2379	0.32	-1.1
2,820,832	-		Echvi_2379	0.32	-2.6
2,820,862	+		Echvi_2379	0.33	-2.5
2,820,863	-		Echvi_2379	0.33	-1.8
2,820,966	+		Echvi_2379	0.38	-1.6
2,821,029	-		Echvi_2379	0.40	-0.3
2,821,046	-		Echvi_2379	0.41	-0.9
2,821,061	+		Echvi_2379	0.42	-1.6
2,821,067	-		Echvi_2379	0.42	-3.4
2,821,119	+		Echvi_2379	0.44	-1.6
2,821,124	-		Echvi_2379	0.45	-2.6
2,821,124	-		Echvi_2379	0.45	-1.3
2,821,191	+		Echvi_2379	0.48	-2.2
2,821,203	+		Echvi_2379	0.48	-0.9
2,821,313	+		Echvi_2379	0.53	-2.8
2,821,313	+		Echvi_2379	0.53	-2.2
2,821,318	-		Echvi_2379	0.53	-0.8
2,821,321	+		Echvi_2379	0.53	-0.8
2,821,321	+		Echvi_2379	0.53	-2.8
2,821,321	+		Echvi_2379	0.53	-1.9
2,821,321	+		Echvi_2379	0.53	-1.9
2,821,321	+		Echvi_2379	0.53	-0.3
2,821,322	-		Echvi_2379	0.53	-4.1
2,821,322	-		Echvi_2379	0.53	-2.6
2,821,322	-		Echvi_2379	0.53	-3.0
2,821,322	-		Echvi_2379	0.53	-2.1
2,821,322	-		Echvi_2379	0.53	-3.4
2,821,322	-		Echvi_2379	0.53	+0.1
2,821,322	-		Echvi_2379	0.53	-0.1
2,821,322	-		Echvi_2379	0.53	-2.4
2,821,322	-		Echvi_2379	0.53	-3.6
2,821,322	-		Echvi_2379	0.53	-1.9
2,821,472	+		Echvi_2379	0.60	-1.6
2,821,472	+		Echvi_2379	0.60	-1.4
2,821,472	+		Echvi_2379	0.60	-0.6
2,821,472	+		Echvi_2379	0.60	-1.6
2,821,473	-		Echvi_2379	0.60	-1.6
2,821,473	-		Echvi_2379	0.60	-1.9
2,821,473	-		Echvi_2379	0.60	-2.3
2,821,477	-		Echvi_2379	0.60	-3.3
2,821,483	+		Echvi_2379	0.60	-0.6
2,821,586	+		Echvi_2379	0.65	-1.4
2,821,650	+		Echvi_2379	0.68	-0.4
2,821,660	+		Echvi_2379	0.68	-1.3
2,821,660	+		Echvi_2379	0.68	-0.4
2,821,697	+		Echvi_2379	0.70	-2.2
2,821,698	-		Echvi_2379	0.70	-3.5
2,821,804	+		Echvi_2379	0.74	-0.5
2,821,805	-		Echvi_2379	0.75	-3.1
2,821,805	-		Echvi_2379	0.75	-3.1
2,821,838	+		Echvi_2379	0.76	-2.6
2,821,867	-		Echvi_2379	0.77	-2.3
2,821,886	+		Echvi_2379	0.78	-2.4
2,821,887	-		Echvi_2379	0.78	-2.6
2,821,921	+		Echvi_2379	0.80	-2.1
2,821,921	+		Echvi_2379	0.80	-2.2
2,821,921	+		Echvi_2379	0.80	-2.6
2,821,934	-		Echvi_2379	0.80	-2.7
2,821,954	-		Echvi_2379	0.81	-2.7
2,821,954	-		Echvi_2379	0.81	-3.1
2,821,954	-		Echvi_2379	0.81	-1.9
2,822,026	+		Echvi_2379	0.84	-0.4
2,822,047	-		Echvi_2379	0.85	-4.3
2,822,050	-		Echvi_2379	0.85	-2.6
2,822,064	+		Echvi_2379	0.86	-3.0
2,822,125	-		Echvi_2379	0.89	-0.3
2,822,125	-		Echvi_2379	0.89	-1.8
2,822,166	+				-1.6
2,822,166	+				-1.5
2,822,225	+				-2.8
2,822,226	-				-0.9
2,822,229	+				-2.1
2,822,229	+				-1.4
2,822,229	+				-3.3
2,822,230	-				-1.8
2,822,231	+				-2.1
2,822,232	-				-3.0
2,822,232	-				-0.6
2,822,317	-				-1.0
2,822,384	-				-0.7
2,822,384	-				+0.8
2,822,401	+				-1.6
2,822,401	+				-2.0
2,822,402	-				-1.6
2,822,402	-				-2.5
2,822,445	+				-0.4
2,822,445	+				-1.0
2,822,445	+				+0.6
2,822,446	-				+0.1
2,822,454	+				-0.4
2,822,465	+				-0.4
2,822,517	+				-0.9
2,822,518	-				-0.6
2,822,518	-				-1.3
2,822,541	-				-0.9
2,822,542	+				-0.1
2,822,543	-				-1.3
2,822,701	+		Echvi_2380	0.24	-1.6
2,822,702	-		Echvi_2380	0.25	-1.3
2,822,778	+		Echvi_2380	0.32	-0.7
2,822,925	+		Echvi_2380	0.47	+1.2
2,822,931	+		Echvi_2380	0.48	+0.5
2,822,963	+		Echvi_2380	0.51	-1.6
2,823,000	-		Echvi_2380	0.55	-1.7
2,823,008	+		Echvi_2380	0.56	-0.7
2,823,051	+		Echvi_2380	0.60	+0.7
2,823,175	+		Echvi_2380	0.72	+1.9
2,823,175	+		Echvi_2380	0.72	-0.3
2,823,237	-		Echvi_2380	0.79	+1.0
2,823,310	+		Echvi_2380	0.86	-1.3
2,823,328	+		Echvi_2380	0.88	-1.4
2,823,329	-		Echvi_2380	0.88	-0.2
2,823,341	+		Echvi_2380	0.89	-1.3
2,823,344	-		Echvi_2380	0.90	-0.3