Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2205

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,630,853	-				-0.3
2,630,853	-				+1.9
2,630,894	+				+0.4
2,630,903	+				+0.3
2,630,906	+				-1.1
2,630,981	-		Echvi_2204	0.11	-1.1
2,631,002	+		Echvi_2204	0.13	-0.5
2,631,003	-		Echvi_2204	0.14	-0.4
2,631,036	+		Echvi_2204	0.18	-2.4
2,631,036	+		Echvi_2204	0.18	-2.9
2,631,037	-		Echvi_2204	0.18	-2.3
2,631,037	-		Echvi_2204	0.18	-1.5
2,631,081	+		Echvi_2204	0.24	-2.6
2,631,114	+		Echvi_2204	0.29	-0.2
2,631,132	+		Echvi_2204	0.31	-1.7
2,631,136	-		Echvi_2204	0.32	-0.8
2,631,148	+		Echvi_2204	0.34	-1.9
2,631,291	-		Echvi_2204	0.53	-0.1
2,631,428	-		Echvi_2204	0.72	-3.4
2,631,434	+		Echvi_2204	0.73	-0.6
2,631,435	-		Echvi_2204	0.73	-1.1
2,631,435	-		Echvi_2204	0.73	-0.6
2,631,521	+		Echvi_2204	0.85	-2.7
2,631,522	-		Echvi_2204	0.85	-0.2
2,631,522	-		Echvi_2204	0.85	-2.3
2,631,541	+		Echvi_2204	0.88	-2.3
2,631,541	+		Echvi_2204	0.88	-1.9
2,631,541	+		Echvi_2204	0.88	-1.6
2,631,541	+		Echvi_2204	0.88	-0.8
2,631,541	+		Echvi_2204	0.88	-1.3
2,631,541	+		Echvi_2204	0.88	+0.3
2,631,542	-		Echvi_2204	0.88	-2.0
2,631,542	-		Echvi_2204	0.88	-2.7
2,631,542	-		Echvi_2204	0.88	-2.2
2,631,542	-		Echvi_2204	0.88	-3.6
2,631,542	-		Echvi_2204	0.88	-0.0
2,631,542	-		Echvi_2204	0.88	-2.7
2,631,542	-		Echvi_2204	0.88	-0.5
2,631,544	-		Echvi_2204	0.88	-1.4
2,631,544	-		Echvi_2204	0.88	-1.8
2,631,588	-				+1.0
2,631,681	-				+0.3
2,631,696	+				-0.1
2,631,706	-				-0.3
2,631,723	+				+0.4
2,631,724	-				-1.8
2,631,856	-				+0.3
2,632,062	-				-1.5
2,632,123	+		Echvi_2205	0.12	+0.8
2,632,125	+		Echvi_2205	0.12	-0.7
2,632,126	-		Echvi_2205	0.12	+0.4
2,632,126	-		Echvi_2205	0.12	-0.1
2,632,126	-		Echvi_2205	0.12	+1.9
2,632,158	+		Echvi_2205	0.13	+0.3
2,632,159	-		Echvi_2205	0.13	+0.7
2,632,228	-		Echvi_2205	0.16	+0.3
2,632,321	-		Echvi_2205	0.19	+0.3
2,632,349	+		Echvi_2205	0.20	+0.7
2,632,462	+		Echvi_2205	0.24	+0.2
2,632,462	+		Echvi_2205	0.24	+0.7
2,632,474	-		Echvi_2205	0.24	+0.9
2,632,538	+		Echvi_2205	0.27	+1.1
2,632,538	+		Echvi_2205	0.27	+0.4
2,632,538	+		Echvi_2205	0.27	+0.2
2,632,539	-		Echvi_2205	0.27	+0.1
2,632,539	-		Echvi_2205	0.27	+1.0
2,632,539	-		Echvi_2205	0.27	+0.7
2,632,606	-		Echvi_2205	0.29	-0.2
2,632,664	+		Echvi_2205	0.31	+0.1
2,632,664	+		Echvi_2205	0.31	+0.6
2,632,664	+		Echvi_2205	0.31	+1.2
2,632,665	-		Echvi_2205	0.31	-0.7
2,632,665	-		Echvi_2205	0.31	-0.1
2,632,803	-		Echvi_2205	0.36	+0.3
2,632,851	+		Echvi_2205	0.38	+0.1
2,632,851	+		Echvi_2205	0.38	+2.5
2,633,062	-		Echvi_2205	0.45	-0.5
2,633,086	-		Echvi_2205	0.46	+2.5
2,633,088	+		Echvi_2205	0.46	+0.4
2,633,088	+		Echvi_2205	0.46	+0.8
2,633,125	+		Echvi_2205	0.48	+0.1
2,633,126	-		Echvi_2205	0.48	+2.0
2,633,221	-		Echvi_2205	0.51	+0.1
2,633,221	-		Echvi_2205	0.51	+1.1
2,633,221	-		Echvi_2205	0.51	+1.0
2,633,221	-		Echvi_2205	0.51	+0.6
2,633,315	-		Echvi_2205	0.54	+0.8
2,633,319	+		Echvi_2205	0.55	+0.2
2,633,320	-		Echvi_2205	0.55	+0.4
2,633,320	-		Echvi_2205	0.55	+0.7
2,633,320	-		Echvi_2205	0.55	+0.1
2,633,320	-		Echvi_2205	0.55	-0.1
2,633,320	-		Echvi_2205	0.55	+0.7
2,633,322	+		Echvi_2205	0.55	-1.4
2,633,323	-		Echvi_2205	0.55	+0.3
2,633,326	-		Echvi_2205	0.55	+0.7
2,633,370	-		Echvi_2205	0.56	+1.2
2,633,421	-		Echvi_2205	0.58	+0.6
2,633,434	+		Echvi_2205	0.59	+0.9
2,633,436	+		Echvi_2205	0.59	+0.8
2,633,436	+		Echvi_2205	0.59	+0.7
2,633,436	+		Echvi_2205	0.59	+0.5
2,633,437	-		Echvi_2205	0.59	+0.8
2,633,437	-		Echvi_2205	0.59	-0.4
2,633,437	-		Echvi_2205	0.59	+0.8
2,633,437	-		Echvi_2205	0.59	+1.1
2,633,445	+		Echvi_2205	0.59	-0.8
2,633,446	-		Echvi_2205	0.59	+1.0
2,633,446	-		Echvi_2205	0.59	+0.7
2,633,491	+		Echvi_2205	0.61	+1.4
2,633,551	+		Echvi_2205	0.63	-0.6
2,633,551	+		Echvi_2205	0.63	+0.6
2,633,649	+		Echvi_2205	0.66	-0.5
2,633,691	-		Echvi_2205	0.68	+0.0
2,633,699	+		Echvi_2205	0.68	+1.1
2,633,794	+		Echvi_2205	0.72	+2.1
2,633,805	+		Echvi_2205	0.72	+0.7
2,633,805	+		Echvi_2205	0.72	+0.7
2,633,805	+		Echvi_2205	0.72	-1.3
2,633,805	+		Echvi_2205	0.72	+0.6
2,633,805	+		Echvi_2205	0.72	+1.4
2,633,806	-		Echvi_2205	0.72	+0.0
2,633,806	-		Echvi_2205	0.72	-0.7
2,633,806	-		Echvi_2205	0.72	+0.3
2,633,806	-		Echvi_2205	0.72	+0.2
2,633,806	-		Echvi_2205	0.72	+0.3
2,633,806	-		Echvi_2205	0.72	+0.2
2,633,806	-		Echvi_2205	0.72	-0.7
2,633,806	-		Echvi_2205	0.72	+1.1
2,633,806	-		Echvi_2205	0.72	+0.6
2,633,806	-		Echvi_2205	0.72	+0.5
2,633,829	+		Echvi_2205	0.73	+1.0
2,633,829	+		Echvi_2205	0.73	-0.6
2,633,829	+		Echvi_2205	0.73	+0.1
2,633,829	+		Echvi_2205	0.73	+1.4
2,633,829	+		Echvi_2205	0.73	+1.0
2,633,830	-		Echvi_2205	0.73	+0.4
2,633,874	-		Echvi_2205	0.74	+1.9
2,633,886	-		Echvi_2205	0.75	+0.6
2,633,930	+		Echvi_2205	0.76	-0.6
2,633,930	+		Echvi_2205	0.76	+0.9
2,633,930	+		Echvi_2205	0.76	+1.4
2,633,931	-		Echvi_2205	0.76	+0.5
2,633,931	-		Echvi_2205	0.76	+1.2
2,633,934	+		Echvi_2205	0.77	+1.7
2,633,934	+		Echvi_2205	0.77	+0.6
2,633,935	-		Echvi_2205	0.77	+1.0
2,633,935	-		Echvi_2205	0.77	+0.8
2,633,935	-		Echvi_2205	0.77	+0.2
2,633,935	-		Echvi_2205	0.77	+0.2
2,633,935	-		Echvi_2205	0.77	+1.2
2,633,935	-		Echvi_2205	0.77	+0.2
2,633,941	+		Echvi_2205	0.77	+0.8
2,634,181	+		Echvi_2205	0.85	-0.5
2,634,243	+		Echvi_2205	0.88	+0.1
2,634,243	+		Echvi_2205	0.88	+0.7
2,634,244	-		Echvi_2205	0.88	+1.0
2,634,253	+		Echvi_2205	0.88	+0.8
2,634,316	-				-0.0
2,634,394	-				-0.1
2,634,551	+				+1.2
2,634,552	-				-0.6
2,634,942	-				-0.8
2,634,952	-				+0.5
2,635,029	-		Echvi_2207	0.17	-2.1
2,635,029	-		Echvi_2207	0.17	-1.8
2,635,031	-		Echvi_2207	0.17	-0.4
2,635,031	-		Echvi_2207	0.17	-2.5
2,635,031	-		Echvi_2207	0.17	+0.8
2,635,047	-		Echvi_2207	0.19	-2.2
2,635,076	-		Echvi_2207	0.23	-1.6
2,635,140	-		Echvi_2207	0.32	-0.3
2,635,415	-		Echvi_2207	0.70	-1.5
2,635,431	+		Echvi_2207	0.72	-0.5
2,635,432	-		Echvi_2207	0.72	-1.5
2,635,456	-		Echvi_2207	0.76	-0.8
2,635,464	-		Echvi_2207	0.77	+0.6
2,635,475	+		Echvi_2207	0.78	-1.3
2,635,476	-		Echvi_2207	0.79	-0.5
2,635,476	-		Echvi_2207	0.79	-2.1