Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2001

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,351,986	+		Echvi_2000	0.62	-1.8
2,351,989	-		Echvi_2000	0.62	-0.8
2,351,989	-		Echvi_2000	0.62	-0.2
2,352,027	-		Echvi_2000	0.64	-0.3
2,352,027	-		Echvi_2000	0.64	-0.7
2,352,027	-		Echvi_2000	0.64	+0.7
2,352,027	-		Echvi_2000	0.64	+0.4
2,352,054	+		Echvi_2000	0.65	+1.4
2,352,066	+		Echvi_2000	0.65	-0.0
2,352,073	-		Echvi_2000	0.66	+0.8
2,352,075	-		Echvi_2000	0.66	-0.2
2,352,124	-		Echvi_2000	0.68	-0.8
2,352,152	-		Echvi_2000	0.69	+0.7
2,352,176	+		Echvi_2000	0.70	-1.6
2,352,177	-		Echvi_2000	0.70	+1.7
2,352,185	+		Echvi_2000	0.70	+0.2
2,352,185	+		Echvi_2000	0.70	+0.4
2,352,185	+		Echvi_2000	0.70	+0.5
2,352,185	+		Echvi_2000	0.70	+0.6
2,352,186	-		Echvi_2000	0.70	+0.6
2,352,186	-		Echvi_2000	0.70	-0.7
2,352,186	-		Echvi_2000	0.70	+0.1
2,352,195	+		Echvi_2000	0.71	+0.6
2,352,226	+		Echvi_2000	0.72	+0.0
2,352,264	-		Echvi_2000	0.73	-0.6
2,352,365	+		Echvi_2000	0.77	+0.8
2,352,366	-		Echvi_2000	0.78	+0.6
2,352,388	-		Echvi_2000	0.78	+0.6
2,352,428	+		Echvi_2000	0.80	+0.6
2,352,456	+		Echvi_2000	0.81	+0.1
2,352,456	+		Echvi_2000	0.81	+1.4
2,352,457	-		Echvi_2000	0.81	+0.0
2,352,558	-		Echvi_2000	0.85	-1.0
2,352,765	+				-0.6
2,352,771	+				+1.8
2,352,783	+				+1.4
2,352,783	+				+0.7
2,352,833	+				+0.0
2,352,833	+				-0.8
2,352,834	-				+0.5
2,352,834	-				-1.4
2,353,092	-		Echvi_2001	0.19	+0.4
2,353,136	-		Echvi_2001	0.24	-0.3
2,353,142	+		Echvi_2001	0.25	+1.1
2,353,168	-		Echvi_2001	0.27	+1.6
2,353,378	-		Echvi_2001	0.50	+0.0
2,353,378	-				+0.3
2,353,378	-		Echvi_2001	0.50	+1.0
2,353,378	-		Echvi_2001	0.50	-0.2
2,353,423	-		Echvi_2001	0.55	-0.2
2,353,423	-		Echvi_2001	0.55	+0.5
2,353,423	-		Echvi_2001	0.55	+0.9
2,353,477	+		Echvi_2001	0.60	+0.7
2,353,477	+		Echvi_2001	0.60	+0.5
2,353,511	+		Echvi_2001	0.64	-0.9
2,353,512	-		Echvi_2001	0.64	+0.4
2,353,552	-		Echvi_2001	0.68	+1.5
2,353,655	-		Echvi_2001	0.79	+1.0
2,353,709	+		Echvi_2001	0.85	-1.8
2,353,709	+		Echvi_2001	0.85	+0.7
2,353,709	+		Echvi_2001	0.85	-0.2
2,353,754	-				+0.0
2,353,765	+				-1.4
2,353,797	+				+1.3
2,353,797	+				+0.6
2,353,797	+				+0.3
2,353,798	-				+0.3
2,353,811	-				+0.3
2,353,815	-				+0.3
2,353,827	+				+0.9
2,353,827	+				+0.4
2,353,828	-				-0.3
2,353,828	-				+1.1
2,353,845	+				+0.2
2,353,846	-				+0.1
2,353,846	-				-0.5
2,353,864	-				+0.6
2,353,937	-				-0.3
2,353,937	-				-0.4
2,353,937	-				+1.6
2,353,937	-				+1.3
2,353,937	-				+0.6
2,353,939	-				-0.3
2,354,014	+		Echvi_2002	0.13	+0.7
2,354,024	+		Echvi_2002	0.14	-0.8
2,354,024	+		Echvi_2002	0.14	-1.1
2,354,082	+		Echvi_2002	0.18	-0.3
2,354,082	+		Echvi_2002	0.18	+0.8
2,354,082	+		Echvi_2002	0.18	+0.3
2,354,082	+		Echvi_2002	0.18	+0.3
2,354,128	+		Echvi_2002	0.22	+0.3
2,354,130	+		Echvi_2002	0.22	-0.0
2,354,130	+		Echvi_2002	0.22	-0.3
2,354,141	+		Echvi_2002	0.23	-0.8
2,354,155	-		Echvi_2002	0.24	-0.9
2,354,285	-		Echvi_2002	0.34	+1.3
2,354,358	+		Echvi_2002	0.39	+1.6
2,354,472	+		Echvi_2002	0.48	+0.6
2,354,472	+		Echvi_2002	0.48	-1.2
2,354,473	-		Echvi_2002	0.48	+0.6
2,354,473	-		Echvi_2002	0.48	+0.3
2,354,473	-		Echvi_2002	0.48	+0.6
2,354,473	-		Echvi_2002	0.48	-0.9
2,354,519	+		Echvi_2002	0.52	-0.5
2,354,525	-		Echvi_2002	0.52	+0.6
2,354,530	+		Echvi_2002	0.53	+1.1
2,354,537	-		Echvi_2002	0.53	-0.0
2,354,537	-		Echvi_2002	0.53	+1.4
2,354,537	-		Echvi_2002	0.53	+0.7
2,354,538	+		Echvi_2002	0.53	-0.0
2,354,538	+		Echvi_2002	0.53	+0.1
2,354,739	+		Echvi_2002	0.69	+0.7
2,354,739	+		Echvi_2002	0.69	+0.8
2,354,791	+		Echvi_2002	0.73	+0.6
2,354,791	+		Echvi_2002	0.73	+0.9
2,354,792	-		Echvi_2002	0.73	+0.7
2,354,792	-		Echvi_2002	0.73	-0.1
2,354,823	-		Echvi_2002	0.75	+0.2