Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1978

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,329,261	-		Echvi_1977	0.52	-0.9
2,329,306	-		Echvi_1977	0.54	+1.4
2,329,306	-		Echvi_1977	0.54	+0.1
2,329,334	+		Echvi_1977	0.55	+0.6
2,329,334	+		Echvi_1977	0.55	+0.0
2,329,337	+		Echvi_1977	0.55	-0.5
2,329,364	+		Echvi_1977	0.57	+0.5
2,329,364	+		Echvi_1977	0.57	-2.0
2,329,365	-		Echvi_1977	0.57	-0.1
2,329,365	-		Echvi_1977	0.57	-0.8
2,329,365	-		Echvi_1977	0.57	-0.3
2,329,435	+		Echvi_1977	0.60	-2.2
2,329,435	+		Echvi_1977	0.60	-1.4
2,329,435	+		Echvi_1977	0.60	+1.1
2,329,435	+		Echvi_1977	0.60	+0.4
2,329,454	+		Echvi_1977	0.61	+0.5
2,329,455	-		Echvi_1977	0.61	-1.1
2,329,496	+		Echvi_1977	0.63	-1.2
2,329,582	+		Echvi_1977	0.68	-0.2
2,329,643	+		Echvi_1977	0.71	+1.5
2,329,644	-		Echvi_1977	0.71	-0.4
2,329,644	-		Echvi_1977	0.71	+1.1
2,329,677	-		Echvi_1977	0.73	-0.3
2,329,679	-		Echvi_1977	0.73	-1.3
2,329,798	-		Echvi_1977	0.79	+0.1
2,329,821	+		Echvi_1977	0.80	-0.0
2,329,821	+		Echvi_1977	0.80	+2.2
2,329,849	+		Echvi_1977	0.81	+0.4
2,329,849	+		Echvi_1977	0.81	+0.6
2,329,886	-		Echvi_1977	0.83	-1.1
2,329,890	+		Echvi_1977	0.83	+1.5
2,329,890	+		Echvi_1977	0.83	-0.4
2,329,890	+		Echvi_1977	0.83	-0.8
2,329,890	+		Echvi_1977	0.83	-1.0
2,329,890	+		Echvi_1977	0.83	+0.4
2,329,891	-		Echvi_1977	0.83	+0.4
2,329,891	-		Echvi_1977	0.83	-1.2
2,329,891	-		Echvi_1977	0.83	-0.4
2,329,891	-		Echvi_1977	0.83	-0.8
2,329,891	-		Echvi_1977	0.83	-1.4
2,329,910	-		Echvi_1977	0.84	-1.4
2,330,031	-				+0.1
2,330,031	-				+1.1
2,330,031	-				+0.2
2,330,033	+				-0.7
2,330,033	+				-0.7
2,330,034	-				+0.9
2,330,034	-				+0.1
2,330,034	-				+0.9
2,330,034	-				+0.4
2,330,037	-				+0.3
2,330,037	-				-0.9
2,330,064	-				-0.4
2,330,079	+				+0.0
2,330,128	+				-0.4
2,330,128	+				+0.5
2,330,128	+				+0.3
2,330,129	-				-0.7
2,330,129	-				-0.7
2,330,129	-				+0.4
2,330,129	-				-0.5
2,330,131	+				-0.5
2,330,132	-				+0.1
2,330,132	-				-0.4
2,330,135	-				+0.5
2,330,148	+				-0.1
2,330,149	-				+1.6
2,330,149	-				+1.1
2,330,149	-				+0.2
2,330,149	-				+1.3
2,330,175	-				+1.1
2,330,205	-				+1.0
2,330,376	-		Echvi_1978	0.13	+1.7
2,330,459	+		Echvi_1978	0.19	+0.7
2,330,482	+		Echvi_1978	0.21	-0.6
2,330,484	+		Echvi_1978	0.22	+1.7
2,330,484	+		Echvi_1978	0.22	+0.1
2,330,484	+		Echvi_1978	0.22	+0.4
2,330,485	-		Echvi_1978	0.22	+1.4
2,330,485	-		Echvi_1978	0.22	+1.9
2,330,541	+		Echvi_1978	0.26	-0.1
2,330,585	+		Echvi_1978	0.30	+0.6
2,330,585	+		Echvi_1978	0.30	-0.2
2,330,586	-		Echvi_1978	0.30	+0.1
2,330,634	+		Echvi_1978	0.34	+0.5
2,330,663	-		Echvi_1978	0.37	+1.5
2,330,663	-		Echvi_1978	0.37	+2.3
2,330,666	+		Echvi_1978	0.37	+1.2
2,330,667	-		Echvi_1978	0.37	+1.8
2,330,843	+		Echvi_1978	0.52	-0.6
2,330,843	+		Echvi_1978	0.52	+0.8
2,330,843	+		Echvi_1978	0.52	+0.0
2,330,845	+		Echvi_1978	0.52	+0.7
2,330,929	-		Echvi_1978	0.59	+0.8
2,330,977	+		Echvi_1978	0.63	+0.8
2,331,069	-		Echvi_1978	0.70	+0.7
2,331,084	-		Echvi_1978	0.72	+0.4
2,331,114	+		Echvi_1978	0.74	+0.3
2,331,121	+		Echvi_1978	0.75	+0.1
2,331,141	+		Echvi_1978	0.76	-0.0
2,331,141	+		Echvi_1978	0.76	+1.4
2,331,141	+		Echvi_1978	0.76	-1.1
2,331,142	-		Echvi_1978	0.77	+0.5
2,331,143	+		Echvi_1978	0.77	-1.0
2,331,144	-		Echvi_1978	0.77	+1.2
2,331,155	-		Echvi_1978	0.78	+2.2
2,331,155	-		Echvi_1978	0.78	+0.9
2,331,221	+		Echvi_1978	0.83	+0.3
2,331,221	+		Echvi_1978	0.83	-0.8
2,331,222	-		Echvi_1978	0.83	+1.8
2,331,248	+		Echvi_1978	0.85	+0.0
2,331,249	-		Echvi_1978	0.85	-0.1
2,331,258	+		Echvi_1978	0.86	+0.1
2,331,314	+				-0.5
2,331,315	-				+2.0
2,331,373	+				+0.3
2,331,422	+				+0.5
2,331,423	-				+1.0
2,331,425	+				+0.5
2,331,425	+				-0.5
2,331,425	+				-0.5
2,331,425	+				+0.9
2,331,426	-				+1.8
2,331,426	-				-1.6
2,331,426	-				-0.9
2,331,428	-				-0.5
2,331,437	-				+0.3
2,331,437	-				-0.5
2,331,488	+		Echvi_1979	0.17	-0.9
2,331,488	+		Echvi_1979	0.17	+0.8
2,331,601	+		Echvi_1979	0.46	+1.1
2,331,608	-		Echvi_1979	0.48	+0.9
2,331,608	-		Echvi_1979	0.48	+2.6
2,331,621	+		Echvi_1979	0.51	+0.7
2,331,621	+		Echvi_1979	0.51	-0.2
2,331,794	-				+0.8
2,331,794	-				+0.9
2,331,977	+				-2.1
2,331,980	+				-0.4
2,332,091	-		Echvi_1980	0.44	+0.4
2,332,101	+		Echvi_1980	0.49	+0.2
2,332,102	-		Echvi_1980	0.49	+1.3
2,332,327	-				+0.1